Job Description P39353 Confidence 100.00% Date Thu Jan 5 11:59:42 GMT 2012 Rank 8 Aligned Residues 344 % Identity 15% Template c3dtyA_ PDB info PDB header:oxidoreductase Chain: A: PDB Molecule:oxidoreductase, gfo/idh/moca family; PDBTitle: crystal structure of an oxidoreductase from pseudomonas2 syringae Resolution 2.04 Å

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		2	.	.	.	.	.	.	.	10				.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30		.	.	.			.	.	.	.	.	.	40	.	.	.	.	.	.	.				.	.	50	.	.	.	.	.	.	.						.	.	60	.	.	.	.	.	.	.
Predicted Secondary structure											.	.	.																					.				.	.															.	.	.											.	.	.	.	.
Query SS confidence											.	.	.																					.				.	.															.	.	.											.	.	.	.	.
Query Sequence		I	N	Y	G	V	V	G	V	G	.	.	.	Y	F	G	A	E	L	A	R	F	M	N	M	H	D	N	A	K	I	T	C	.	V	Y	D	.	.	P	E	N	G	E	N	I	A	R	E	L	Q	C	I	.	.	.	N	M	S	S	L	D	A	L	V	S	.	.	.	.	.	S	K	L	V	D	C	V	I	V	A
Query Conservation											.	.	.																					.				.	.															.	.	.											.	.	.	.	.
Alig confidence											.	.	.																					.				.	.															.	.	.											.	.	.	.	.
Template Conservation
Template Sequence		I	R	W	A	X	V	G	G	G	S	Q	S	Q	I	G	Y	I	H	R	C	A	A	L	R	D	N	T	F	V	L	V	A	G	A	F	D	I	D	P	I	R	G	S	A	F	G	E	Q	L	G	V	D	S	E	R	C	Y	A	D	Y	L	S	X	F	E	Q	E	A	R	R	A	D	G	I	Q	A	V	S	I	A
Template Known Secondary structure											T	T		S	S										G	G	G	S										S	S											T	T			G	G	G	B		S	S									T	T		T	T			S
Template Predicted Secondary structure
Template SS confidence
		12	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.
		68	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		T	P	N	Y	L	H	K	E	P	V	I	K	A	A	K	N	K	K	H	V	F	C	E	K	P	I	A	L	S	Y	E	D	C	V	D	M	V	K	A	C	K	E	A	G	V	T	F	M	A	G	H	I	M	N	F	F	N	G	V	Q	Y	A	R	K	L	I	K	E	G	V	I	G	E	I	L	S	C	H	T	K
Query Conservation
Alig confidence
Template Conservation
Template Sequence		T	P	N	G	T	H	Y	S	I	T	K	A	A	L	E	A	G	L	H	V	V	C	E	K	P	L	C	F	T	V	E	Q	A	E	N	L	R	E	L	S	H	K	H	N	R	I	V	G	V	T	Y	G	Y	A	G	H	Q	L	I	E	Q	A	R	E	X	I	A	A	G	E	L	G	D	V	R	X	V	H	X	Q
Template Known Secondary structure		S		G	G	G											T	T							S		S		S															T	T								G	G	G	G	S												T	T	T	T		S
Template Predicted Secondary structure
Template SS confidence
		92	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.
		148	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.		.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.
Predicted Secondary structure																																										.
Query SS confidence																																										.
Query Sequence		R	N	G	W	E	N	K	Q	E	R	L	S	W	K	K	M	K	E	Q	S	G	G	H	L	Y	H	H	I	H	E	L	D	C	V	Q	H	L	L	G	E	.	I	P	E	T	V	T	M	I	G	G	N	L	A	H	S	G	P	G	F	G	N	E	D	D	M	L	F	M	T	L	E	F	P	S	G	K	L	A	T
Query Conservation																																										.
Alig confidence						.	.	.	.	.	.	.	.	.																												.																		.	.	.
Template Conservation						.	.	.	.	.	.	.	.	.																																														.	.	.
Template Sequence		F	A	H	G	.	.	.	.	.	.	.	.	.	F	H	S	A	G	P	S	Y	V	L	G	D	V	G	T	H	P	L	Y	L	S	E	V	X	L	P	D	L	K	I	K	R	L	X	C	S	R	Q	S	F	V	A	S	R	A	.	.	.	P	L	E	D	N	A	Y	T	L	X	E	Y	E	G	G	A	X	G	X
Template Known Secondary structure						.	.	.	.	.	.	.	.	.	T	T						S					T	T												T	T													S	S	G	G	G	T	.	.	.	T	S		S									T	T	S
Template Predicted Secondary structure						.	.	.	.	.	.	.	.	.																																														.	.	.
Template SS confidence
		172	.	.	.										.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220				.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.
		227	.	.	230	.	.	.	.	.	.	.	.	.			240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.
Predicted Secondary structure															.	.
Query SS confidence															.	.
Query Sequence		L	E	W	G	S	A	F	N	W	P	E	H	Y	.	.	V	I	I	N	G	T	K	G	S	I	K	I	D	M	Q	E	T	A	G	S	L	R	I	G	G	Q	T	K	H	F	L	V	H	E	T	Q	E	E	D	D	D	R	R	K	G	N	M	T	S	E	M	D	G	A	I	A	Y	G	H	P	G	K	K	T	P
Query Conservation															.	.
Alig confidence															.	.																																																														.	.	.	.
Template Conservation																																																																														.	.	.	.
Template Sequence		V	W	S	S	A	V	N	A	G	S	X	H	G	Q	K	I	R	V	I	G	S	R	A	S	L	E	W	W	D	E	R	P	N	Q	L	S	F	E	V	Q	G	Q	P	A	Q	I	L	E	R	G	X	G	Y	L	H	P	N	A	L	I	D	D	R	I	G	G	G	H	P	E	G	L	F	E	A	W	.	.	.	.
Template Known Secondary structure						S			T	T		S										S	S							T	T	S	T	T							T	T	S							T	T		T	T	S		G	G	G	T	T	T			S		T	T	S									.	.	.	.
Template Predicted Secondary structure																																																																														.	.	.	.
Template SS confidence
		258	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.
		305	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.		.	360	.	.	.	.
Predicted Secondary structure																																																								.
Query SS confidence																																																								.
Query Sequence		L	W	L	A	S	L	I	R	K	E	T	L	F	L	H	N	I	L	C	G	A	K	P	E	E	D	Y	I	D	L	L	N	G	E	A	A	M	S	A	I	A	T	A	D	A	A	T	L	S	R	S	Q	D	R	.	K	V	K	I	S	E
Query Conservation																																																								.
Alig confidence		.	.	.																																																				.
Template Conservation		.	.	.
Template Sequence		.	.	.	A	N	L	Y	Y	R	F	A	L	A	X	D	A	T	D	R	S	D	T	Q	A	L	S	A	V	R	Y	P	G	I	D	A	G	V	E	G	V	R	W	V	E	R	C	V	L	S	A	D	N	D	S	I	W	V	A	Y	E	G
Template Known Secondary structure		.	.	.																T	T							T																									T	T	T					S	S	S
Template Predicted Secondary structure		.	.	.
Template SS confidence
					334	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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