Job Description P39353 Confidence 93.59% Date Thu Jan 5 11:59:42 GMT 2012 Rank 467 Aligned Residues 119 % Identity 15% Template c3donA_ PDB info PDB header:oxidoreductase Chain: A: PDB Molecule:shikimate dehydrogenase; PDBTitle: crystal structure of shikimate dehydrogenase from staphylococcus2 epidermidis Resolution 2.10 Å

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		3	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.		.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.
Predicted Secondary structure																																.
Query SS confidence																																.
Query Sequence		N	Y	G	V	V	G	V	G	Y	F	G	A	E	L	A	R	F	M	N	M	H	D	N	A	K	I	T	C	V	Y	.	D	P	E	N	G	E	N	I	A	R	E	L	Q	C	I	N	M	S	S	L	D	A	L	V	S	S	K	L	V	D	C	V	I	V	A	T	P	N	Y	L	H	K	E	P	V	I	K	A	A
Query Conservation																																.
Alig confidence																																.																											.	.													.	.	.
Template Conservation																																																											.	.													.	.	.
Template Sequence		Y	I	L	I	L	G	A	G	G	A	S	K	G	I	A	N	E	L	Y	K	I	V	R	P	T	L	T	V	A	N	R	T	M	S	R	F	N	N	W	S	L	N	I	N	K	I	N	L	S	H	A	E	S	H	L	D	E	.	.	F	D	I	I	I	N	T	T	P	D	S	V	.	.	.	I	S	L	N	R	L
Template Known Secondary structure									S												T	T			S							S		G	G	G	G	T	T			S													T	G	G	G	.	.		S										S	.	.	.	S			T	T
Template Predicted Secondary structure																																																											.	.													.	.	.
Template SS confidence
		119	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.			.	.	.	.	180	.	.	.	.	.	.	.				.	.	190	.	.	.
		82	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130
Predicted Secondary structure
Query SS confidence
Query Sequence		K	N	K	K	H	V	F	C	E	K	P	I	A	L	S	Y	E	D	C	V	D	M	V	K	A	C	K	E	A	G	V	T	F	M	A	G	H	I	M	N	F	F	N	G	V	Q	Y	A	R
Query Conservation
Alig confidence										.	.	.								.
Template Conservation										.	.	.								.
Template Sequence		A	S	H	T	L	V	S	D	.	.	.	I	V	Y	N	P	Y	K	.	T	P	I	L	I	E	A	E	Q	R	G	N	P	I	Y	N	G	L	D	M	F	V	H	Q	G	A	E	S	F	K
Template Known Secondary structure			S	S						.	.	.	S			S	S	S	S	.										T	T						T
Template Predicted Secondary structure										.	.	.								.
Template SS confidence
		201	.	.	.	.	.	.	.				.	210	.	.	.	.	.		.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions