Job Description P39353 Confidence 99.73% Date Thu Jan 5 11:59:42 GMT 2012 Rank 60 Aligned Residues 142 % Identity 20% Template c3do5A_ PDB info PDB header:oxidoreductase Chain: A: PDB Molecule:homoserine dehydrogenase; PDBTitle: crystal structure of putative homoserine dehydrogenase (np_069768.1)2 from archaeoglobus fulgidus at 2.20 a resolution Resolution 2.20 Å

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		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.									.	.	.	.	.	.	30	.	.	.	.												.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.
Predicted Secondary structure																									.	.	.	.	.	.	.	.												.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																									.	.	.	.	.	.	.	.												.	.	.	.	.	.	.	.	.	.	.
Query Sequence		M	I	N	Y	G	V	V	G	V	G	Y	F	G	A	E	L	A	R	F	M	N	M	H	.	.	.	.	.	.	.	.	D	N	A	K	I	T	C	V	Y	D	P	.	.	.	.	.	.	.	.	.	.	.	E	N	G	E	N	I	A	R	E	L	Q	C	I	N	M	S	S	L	D	A	L	V	S	S	K	L	V
Query Conservation																									.	.	.	.	.	.	.	.												.	.	.	.	.	.	.	.	.	.	.
Alig confidence																									.	.	.	.	.	.	.	.												.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		X	I	K	I	A	I	V	G	F	G	T	V	G	Q	G	V	A	E	L	L	I	R	K	R	E	E	I	E	K	A	I	G	E	F	K	V	T	A	V	A	D	S	K	S	S	I	S	G	D	F	S	L	V	E	A	L	R	X	K	R	E	T	G	X	L	R	D	D	A	K	A	I	E	V	V	R	S	A	D	Y
Template Known Secondary structure											S													T																			S	S					S	S														S	S		S	B											S
Template Predicted Secondary structure
Template SS confidence
		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80
		62	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.		.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.		.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																												.																														.
Query SS confidence																												.																														.
Query Sequence		D	C	V	I	V	A	T	P	N	Y	L	H	K	E	P	V	I	K	A	A	K	N	K	K	H	V	.	F	C	E	K	P	I	A	L	S	Y	E	D	C	V	D	M	V	K	A	C	K	E	A	G	V	T	F	M	A	.	G	H	I	M	N	F	F	N	G	V	Q	Y	A	R	K	L	I	K	E	G	V	I	G
Query Conservation																												.																														.
Alig confidence																												.							.	.																						.
Template Conservation																																			.	.
Template Sequence		D	V	L	I	E	A	S	V	T	R	E	G	V	N	Y	I	R	E	A	L	K	R	G	K	H	V	V	T	S	N	K	G	P	.	.	L	V	A	E	F	H	G	L	X	S	L	A	E	R	N	G	V	R	L	X	Y	E	A	T	V	G	G	A	X	P	V	V	K	L	A	K	R	Y	L	A	L	C	E	I	E
Template Known Secondary structure		S																				T	T	T								S			.	.															T	T						G	G	G	S	S	T	T	S								T	T	T	T	T	S
Template Predicted Secondary structure																																			.	.
Template SS confidence
		81	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.			.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.
		140	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		E	I	L	S	C
Query Conservation
Alig confidence
Template Conservation
Template Sequence		S	V	K	G	I
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		163	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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