Job Description P39353 Confidence 98.41% Date Thu Jan 5 11:59:42 GMT 2012 Rank 102 Aligned Residues 123 % Identity 15% Template c3ckyA_ PDB info PDB header:oxidoreductase Chain: A: PDB Molecule:2-hydroxymethyl glutarate dehydrogenase; PDBTitle: structural and kinetic properties of a beta-hydroxyacid dehydrogenase2 involved in nicotinate fermentation Resolution 2.30 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.		.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80
Predicted Secondary structure																																	.
Query SS confidence																																	.
Query Sequence		I	N	Y	G	V	V	G	V	G	Y	F	G	A	E	L	A	R	F	M	N	M	H	D	N	A	K	I	T	C	V	Y	.	D	P	E	N	G	E	N	I	A	R	E	L	Q	C	I	N	M	S	S	L	D	A	L	V	S	S	K	L	V	D	C	V	I	V	A	T	P	N	Y	L	H	K	E	P	V	I	K	A
Query Conservation																																	.
Alig confidence																								.									.										.																	.	.
Template Conservation																								.																			.																	.	.
Template Sequence		I	K	I	G	F	I	G	L	G	A	M	G	K	P	M	A	I	N	L	L	K	E	.	G	V	T	V	Y	A	F	D	L	M	E	A	N	V	A	A	V	V	.	A	Q	G	A	Q	A	C	E	N	N	Q	K	V	A	A	A	.	.	S	D	I	I	F	T	S	L	P	N	A	G	I	V	E	T	V	M	N	G
Template Known Secondary structure											T	T											T	.	T								S	S									.	T	T	T					S	S								.	.		S							S	S										S
Template Predicted Secondary structure																								.																			.																	.	.
Template SS confidence
		5	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.		.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.		.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60			.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80
		81	.	.	.	.	.	.	.	.	90	.	.	.						.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.
Predicted Secondary structure															.	.	.	.	.
Query SS confidence															.	.	.	.	.
Query Sequence		A	K	N	K	K	H	V	F	C	E	K	P	I	.	.	.	.	.	A	L	S	Y	E	D	C	V	D	M	V	K	A	C	K	E	A	G	V	T	F	M	A	G	H	I	M	N	F	F	N	G	V	Q	Y
Query Conservation															.	.	.	.	.
Alig confidence															.	.	.	.	.
Template Conservation
Template Sequence		P	G	G	V	L	S	A	C	K	A	G	T	V	I	V	D	M	S	S	V	S	P	S	S	T	L	K	M	A	K	V	A	A	E	K	G	I	D	Y	V	D	A	P	V	S	G	G	T	K	G	A	E	A
Template Known Secondary structure		T	T						S		T	T																								T	T										S
Template Predicted Secondary structure
Template SS confidence
		81	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions