Job Description P39353 Confidence 98.86% Date Thu Jan 5 11:59:42 GMT 2012 Rank 84 Aligned Residues 142 % Identity 15% Template c3c8mA_ PDB info PDB header:oxidoreductase Chain: A: PDB Molecule:homoserine dehydrogenase; PDBTitle: crystal structure of homoserine dehydrogenase from thermoplasma2 volcanium Resolution 1.90 Å

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		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.								.	.	.	.	30	.	.	.	.	.															.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60
Predicted Secondary structure																										.	.	.	.	.	.	.											.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																										.	.	.	.	.	.	.											.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		I	N	Y	G	V	V	G	V	G	Y	F	G	A	E	L	A	R	F	M	N	M	H	D	N	.	.	.	.	.	.	.	A	K	I	T	C	V	Y	D	P	E	.	.	.	.	.	.	.	.	.	.	.	.	.	.	N	G	E	N	I	A	R	E	L	Q	C	I	N	M	S	S	L	D	A	L	V	S	S	K	L
Query Conservation																										.	.	.	.	.	.	.											.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																										.	.	.	.	.	.	.											.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		I	N	L	S	I	F	G	L	G	N	V	G	L	N	L	L	R	I	I	R	S	F	N	E	E	N	R	L	G	L	K	F	N	V	V	F	V	A	D	S	L	H	S	Y	Y	N	E	R	I	D	I	G	K	V	I	S	Y	K	E	K	G	S	L	D	S	L	E	Y	E	S	I	S	A	S	E	A	L	A	R	D
Template Known Secondary structure										S																		S	S	S											S	S						T	T												T	T		G	G	G			S											S	S
Template Predicted Secondary structure
Template SS confidence
		4	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.
		61	.	.	.	.	.	.	.	.	70	.	.	.					.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.		.	.	.	.	.	.	130	.	.	.	.	.
Predicted Secondary structure															.	.	.	.																																																			.
Query SS confidence															.	.	.	.																																																			.
Query Sequence		V	D	C	V	I	V	A	T	P	N	Y	L	H	.	.	.	.	K	E	P	V	I	K	A	A	K	N	K	K	H	V	F	C	E	K	P	I	A	L	S	Y	E	D	C	V	D	M	V	K	A	C	K	E	A	G	V	T	F	M	A	G	H	I	M	N	F	F	.	N	G	V	Q	Y	A	R	K	L	I	K	E
Query Conservation															.	.	.	.																																																			.
Alig confidence															.	.	.	.																				.																															.
Template Conservation																																						.
Template Sequence		F	D	I	V	V	D	A	T	P	A	S	A	D	G	K	K	E	L	A	F	Y	K	E	T	F	E	N	G	K	D	V	V	T	A	N	K	.	S	G	L	A	N	F	W	P	E	I	X	E	Y	A	R	S	N	N	R	R	I	R	Y	E	A	T	V	A	G	G	V	P	L	F	S	F	I	D	Y	S	V	L	P
Template Known Secondary structure			S						S				S	S	S													T	T									.																		T						G	G	G	S	S	T	T	S										S	T	T
Template Predicted Secondary structure																																						.
Template SS confidence
		84	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.		120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.
		136	.	.	.	140	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		G	V	I	G	E	I	L	S	C
Query Conservation
Alig confidence
Template Conservation
Template Sequence		S	R	I	K	K	F	R	G	I
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		163	.	.	.	.	.	.	170	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions