Return to main results Retrieve Phyre Job Id

Job DescriptionP39353
Confidence97.68%DateThu Jan 5 11:59:42 GMT 2012
Rank174Aligned Residues88
% Identity19%Templatec3au9A_
PDB info PDB header:isomerase/isomerase inhibitorChain: A: PDB Molecule:1-deoxy-d-xylulose 5-phosphate reductoisomerase; PDBTitle: crystal structure of the quaternary complex-1 of an isomerase
Resolution1.90 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   2...... .10.........20... ......30.. .......40.........50
Predicted Secondary structure 
.


....


...





.......................
Query SS confidence 






.














. . . .








. . .

















. . . . . . . . . . . . . . . . . . . . . . .
Query Sequence  INYGVVG. VGYFGAELARFMNMH. . . . DNAKITCVY. . . DPENGENIARELQCINMS. . . . . . . . . . . . . . . . . . . . . . .
Query Conservation 






. 
  
          ....    



 ...
   
   
       
 .......................
Alig confidence 






.














....








...

















.......................
Template Conservation 
 
 








 


 

      

 
 
 



  
   
  
   
 
  
 
 
      
   
         
Template Sequence  INVAIFGSTGSIGTNALNIIRECNKIENVFNVKALYVNKSVNELYEQAREFLPEYLCIHDKSVYEELKELVKNIKDYKPI
Template Known Secondary structure  TTTSS

SS


SS
GGGTTSTT


Template Predicted Secondary structure 



























Template SS confidence 















































































   78.80.........90.........100.........110.........120.........130.........140.........150.......
 
   51........60.........70.........80.........
Predicted Secondary structure  ......















Query SS confidence  . . . . . .






































Query Sequence  . . . . . . SLDALVSSKLVDCVIVATPNYLHKEPVIKAAKNKKHVFC
Query Conservation  ......   


    

 
 
 

   
      

  



  
Alig confidence  ......






































Template Conservation 
  
 
 
  
      
 

 

 
 


 

  

  

 


Template Sequence  ILCGDEGMKEICSSNSIDKIVIGIDSFQGLYSTMYAIMNNKIVAL
Template Known Secondary structure  T
TT




STTTT
Template Predicted Secondary structure 







Template SS confidence 












































   158.160.........170.........180.........190.........200..
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions