Job Description P39353 Confidence 98.54% Date Thu Jan 5 11:59:42 GMT 2012 Rank 95 Aligned Residues 110 % Identity 17% Template c2yv2A_ PDB info PDB header:ligase Chain: A: PDB Molecule:succinyl-coa synthetase alpha chain; PDBTitle: crystal structure of succinyl-coa synthetase alpha chain from2 aeropyrum pernix k1 Resolution 2.20 Å

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		3	.	.	.	.	.	.		10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.		.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80
Predicted Secondary structure									.																																																	.
Query SS confidence									.																																																	.
Query Sequence		N	Y	G	V	V	G	V	.	G	Y	F	G	A	E	L	A	R	F	M	N	M	H	D	N	A	K	I	T	C	V	Y	D	P	E	N	G	E	N	I	A	R	E	L	Q	C	I	N	M	S	S	L	D	A	L	V	S	.	S	K	L	V	D	C	V	I	V	A	T	P	N	Y	L	H	K	E	P	V	I	K	A
Query Conservation									.																																																	.
Alig confidence									.															.											.	.																						.
Template Conservation																								.											.	.
Template Sequence		R	V	L	V	Q	G	I	T	G	R	E	G	S	F	H	A	K	A	M	L	E	Y	.	G	T	K	V	V	A	G	V	T	P	.	.	G	K	G	G	S	E	V	H	G	V	P	V	Y	D	S	V	K	E	A	L	A	E	H	P	E	I	N	T	S	I	V	F	V	P	A	P	F	A	P	D	A	V	Y	E	A
Template Known Secondary structure							T	T	T	S														.	T									T	.	.	T		T	T				T	T					S	S									T	T										G	G	G
Template Predicted Secondary structure																								.											.	.
Template SS confidence
		15	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.		.	.	.	40	.	.	.	.	.	.			.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.
		81	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	K	N	K	K	H	V	F	C	E	K	P	I	A	L	S	Y	E	D	C	V	D	M	V	K	A	C	K	E	A	G	V	T	F	M
Query Conservation
Alig confidence
Template Conservation
Template Sequence		V	D	A	G	I	R	L	V	V	V	I	T	E	G	I	P	V	H	D	T	M	R	F	V	N	Y	A	R	Q	K	G	A	T	I	I
Template Known Secondary structure				T	T		S																									T
Template Predicted Secondary structure
Template SS confidence
		92	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions