Job Description P39353 Confidence 95.13% Date Thu Jan 5 11:59:42 GMT 2012 Rank 397 Aligned Residues 68 % Identity 25% Template c2ldxA_ PDB info PDB header:oxidoreductase(choh(d)-nad(a)) Chain: A: PDB Molecule:apo-lactate dehydrogenase; PDBTitle: characterization of the antigenic sites on the refined 3-2 angstroms resolution structure of mouse testicular lactate3 dehydrogenase c4 Resolution 2.96 Å

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		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.			.	.	.	.	.	.	40	.	.	.	.										.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70
Predicted Secondary structure																																		.	.												.	.	.	.	.	.	.	.	.
Query SS confidence																																		.	.												.	.	.	.	.	.	.	.	.
Query Sequence		I	N	Y	G	V	V	G	V	G	Y	F	G	A	E	L	A	R	F	M	N	M	H	D	N	A	K	I	T	C	V	Y	D	.	.	P	E	N	G	E	N	I	A	R	E	L	.	.	.	.	.	.	.	.	.	Q	C	I	N	M	S	S	L	D	A	L	V	S	S	K	L	V	D	C	V	I	V	A	T	P	N
Query Conservation																																		.	.												.	.	.	.	.	.	.	.	.
Alig confidence																																		.	.												.	.	.	.	.	.	.	.	.															.	.
Template Conservation																																																																						.	.
Template Sequence		C	K	I	T	V	V	G	V	G	D	V	G	M	A	C	A	I	S	I	L	L	K	G	L	A	D	E	L	A	L	V	D	A	D	T	D	K	L	R	G	E	A	L	D	L	Q	H	G	S	L	F	L	S	T	P	K	I	V	F	G	K	D	Y	N	V	S	A	N	.	.	S	K	L	V	I	I	T	A	G	A
Template Known Secondary structure										S												T	T	T	S		S							S															T	T	T	T		S								S	S	G	G	G	G	T	T	.	.									S
Template Predicted Secondary structure																																																																						.	.
Template SS confidence
		20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.			.	.	90	.	.	.	.	.	.	.
		71
Predicted Secondary structure
Query SS confidence
Query Sequence		Y
Query Conservation
Alig confidence
Template Conservation
Template Sequence		R
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		98

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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