Job Description P39353 Confidence 98.84% Date Thu Jan 5 11:59:42 GMT 2012 Rank 86 Aligned Residues 204 % Identity 13% Template c2jcyA_ PDB info PDB header:oxidoreductase Chain: A: PDB Molecule:1-deoxy-d-xylulose 5-phosphate reductoisomerase; PDBTitle: x-ray structure of mutant 1-deoxy-d-xylulose 5-phosphate2 reductoisomerase, dxr, rv2870c, from mycobacterium3 tuberculosis Resolution 2.35 Å

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		2	.	.	.	.	.	.	.		10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.		.	.	.	.	30	.	.					.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.																				50	.	.	.	.	.	.
Predicted Secondary structure										.																	.								.	.	.	.																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence										.																	.								.	.	.	.																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		I	N	Y	G	V	V	G	V	.	G	Y	F	G	A	E	L	A	R	F	M	N	M	H	D	N	.	A	K	I	T	C	V	Y	.	.	.	.	D	P	E	N	G	E	N	I	A	R	E	L	Q	C	I	N	M	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	S	S	L	D	A	L	V
Query Conservation										.																	.								.	.	.	.																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence										.																	.								.	.	.	.																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		L	R	V	V	V	L	G	S	T	G	S	I	G	T	Q	A	L	Q	V	I	A	D	N	P	D	R	F	E	V	V	G	L	A	A	G	G	A	H	L	D	T	L	L	R	Q	R	A	Q	T	G	V	T	N	I	A	V	A	D	E	H	A	A	Q	R	V	G	D	I	P	Y	H	G	S	D	A	A	T	R	L	V
Template Known Secondary structure								S	T	T	S														T	T	T										S	S																				S	S											S			S	T	T
Template Predicted Secondary structure
Template SS confidence
		13	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.
		57	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		S	S	K	L	V	D	C	V	I	V	A	T	P	N	Y	L	H	K	E	P	V	I	K	A	A	K	N	K	K	H	V	F	C	E	K	P	I	A	L	S	Y	E	D	C	V	D	M	V	K	A	C	K	E	A	G	V	T	F	M	A	G	H	I	M	N	F	F	N	G	V	Q	Y	A	R	K	L	I	K	E	G
Query Conservation
Alig confidence																																									.																	.	.	.	.	.	.	.
Template Conservation																																									.																	.	.	.	.	.	.	.
Template Sequence		E	Q	T	E	A	D	V	V	L	N	A	L	V	G	A	L	G	L	R	P	T	L	A	A	L	K	T	G	A	R	L	A	L	A	N	K	E	S	L	.	V	A	G	G	S	L	V	L	R	A	A	R	P	G	Q	I	.	.	.	.	.	.	.	V	P	V	N	S	E	H	S	A	L	A	Q	C	L	R	G	G
Template Known Secondary structure				S			S								G	G	G	G										T	T								S				.		T	T										T	T			.	.	.	.	.	.	.				S										G	G	G	S
Template Predicted Secondary structure																																									.																	.	.	.	.	.	.	.
Template SS confidence
		93	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.		.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.								.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.
		137	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.																.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.			.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																								.	.
Query SS confidence																								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																								.	.
Query Sequence		V	I	G	E	I	L	S	C	H	T	K	R	N	G	W	E	N	K	Q	E	R	L	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	S	W	K	K	M	K	E	Q	S	G	G	H	L	Y	H	H	I	H	E	L	D	C	V	.	.	Q	H	L	L	G	E	I	P	E	T	V	T	M	I	G	G	N	L
Query Conservation																								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																								.	.
Alig confidence																								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																								.	.
Template Conservation
Template Sequence		T	P	D	E	V	A	K	L	V	L	T	A	S	G	G	P	F	R	G	W	S	A	A	D	L	E	H	V	T	P	E	Q	A	G	A	H	P	T	W	S	M	G	P	M	N	T	L	N	S	A	S	L	V	N	K	G	L	Q	V	I	E	T	H	L	L	F	G	I	P	Y	D	R	I	D	V	V	V	H	P	Q
Template Known Secondary structure			G	G	G												T	T	T	T							T	T							T	S	S		S	S	S												T																		G	G	G							T	T
Template Predicted Secondary structure
Template SS confidence
		165	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.
		200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	H	S	G	P	G	F	G	N	E	D	D	M	L	F	M	T	L	E	F	P	S	G	K	L
Query Conservation
Alig confidence		.	.	.	.	.	.	.	.	.	.	.
Template Conservation		.	.	.	.	.	.	.	.	.	.	.
Template Sequence		.	.	.	.	.	.	.	.	.	.	.	S	I	I	H	S	M	V	T	F	I	D	G	S	T
Template Known Secondary structure		.	.	.	.	.	.	.	.	.	.	.										T	T	S
Template Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
													245	.	.	.	.	250	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions