Job Description P39353 Confidence 95.01% Date Thu Jan 5 11:59:42 GMT 2012 Rank 408 Aligned Residues 91 % Identity 19% Template c2hlpB_ PDB info PDB header:oxidoreductase Chain: B: PDB Molecule:malate dehydrogenase; PDBTitle: crystal structure of the e267r mutant of a halophilic2 malate dehydrogenase in the apo form Resolution 2.59 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		3	.	.	.	.	.		.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.					.	.	.	.	.	.	40	.	.	.	.									.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.
Predicted Secondary structure								.																										.	.	.	.												.	.	.	.	.	.	.	.																								.	.
Query SS confidence								.																										.	.	.	.												.	.	.	.	.	.	.	.																								.	.
Query Sequence		N	Y	G	V	V	G	.	V	G	Y	F	G	A	E	L	A	R	F	M	N	M	H	D	N	A	K	I	T	C	V	Y	D	.	.	.	.	P	E	N	G	E	N	I	A	R	E	L	.	.	.	.	.	.	.	.	Q	C	I	N	M	S	S	L	D	A	L	V	S	S	K	L	V	D	C	V	I	V	A	.	.
Query Conservation								.																										.	.	.	.												.	.	.	.	.	.	.	.																								.	.
Alig confidence								.																										.	.	.	.												.	.	.	.	.	.	.	.															.	.								.	.
Template Conservation																																																																							.	.
Template Sequence		K	V	S	V	V	G	A	A	G	T	V	G	A	A	A	G	Y	N	I	A	L	R	D	I	A	D	E	V	V	F	V	D	I	P	D	K	E	D	D	T	V	G	Q	A	A	D	T	N	H	G	I	A	Y	D	S	N	T	R	V	R	Q	G	G	Y	E	D	T	A	G	.	.	S	D	V	V	V	I	T	A	G
Template Known Secondary structure							T	T	T	S													T	T			S								G	G	G																T	T	T										G	G	G	G	T	T	.	.		S
Template Predicted Secondary structure																																																																							.	.
Template SS confidence
		23	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.			.	.	.	.	.	.	.	.	100
					68	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.
Predicted Secondary structure		.	.	.
Query SS confidence		.	.	.
Query Sequence		.	.	.	T	P	N	Y	L	H	K	E	P	V	I	K	A	A	K	N	K	K	H	V	F	C	E	K	P	I	A	L	S	Y	E	D	C	V	D	M	V	K	A	C	K	E	A	G
Query Conservation		.	.	.
Alig confidence		.	.	.												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		I	P	R	Q	P	G	Q	T	R	I	D	L	A	G	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	D	N	A	P	I	M	E	D	I	Q	S	S	L	D	E	H	N
Template Known Secondary structure						T	T									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.															T	T
Template Predicted Secondary structure																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		100	.	.	.	.	.	.	.	.	.	110	.	.	.																	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions