Return to main results Retrieve Phyre Job Id

Job DescriptionP39353
Confidence95.10%DateThu Jan 5 11:59:42 GMT 2012
Rank398Aligned Residues89
% Identity12%Templatec2f00A_
PDB info PDB header:ligaseChain: A: PDB Molecule:udp-n-acetylmuramate--l-alanine ligase; PDBTitle: escherichia coli murc
Resolution2.50 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   1........10.........20.........30. ........40.........50.........60.........70.........
Predicted Secondary structure 







.















Query SS confidence 






























.















































Query Sequence  MINYGVVGVGYFGAELARFMNMHDNAKITCV. YDPENGENIARELQCINMSSLDALVSSKLVDCVIVATPNYLHKEPVIK
Query Conservation   






 
  
              



. 
   
   
       
    


    

 
 
 

   
      
Alig confidence 






























.

























.




















Template Conservation   
 
  

 

 
 
 

  
   
  
   
         
   

           .   
 

 



    
    
Template Sequence  VRHIHFVGIGGAGXGGIAEVLANEGYQISGSDLAPNPVTQQLXNLGATIYFNHRPENV. RDASVVVVSSAISADNPEIVA
Template Known Secondary structure 

TTTSTTTT

SS

TT
SS

GGGG.TT
S
TT

TT
Template Predicted Secondary structure 



















.











Template SS confidence 















































































   1920.........30.........40.........50.........60.........70...... ...80.........90.......
 
   80.........90
Predicted Secondary structure 






Query SS confidence 










Query Sequence  AAKNKKHVFCE
Query Conservation 

  



  
Alig confidence 










Template Conservation 
    
 
   
Template Sequence  AHEARIPVIRR
Template Known Secondary structure  TT

Template Predicted Secondary structure 



Template SS confidence 










   98.100........
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions