Job Description P39353 Confidence 95.23% Date Thu Jan 5 11:59:42 GMT 2012 Rank 394 Aligned Residues 118 % Identity 16% Template c2ev9B_ PDB info PDB header:oxidoreductase Chain: B: PDB Molecule:shikimate 5-dehydrogenase; PDBTitle: crystal structure of shikimate 5-dehydrogenase (aroe) from thermus2 thermophilus hb8 in complex with nadp(h) and shikimate Resolution 1.90 Å

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		3	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.					.	.	.	.	.
Predicted Secondary structure																																																																									.	.	.	.
Query SS confidence																																																																									.	.	.	.
Query Sequence		N	Y	G	V	V	G	V	G	Y	F	G	A	E	L	A	R	F	M	N	M	H	D	N	A	K	I	T	C	V	Y	D	P	E	N	G	E	N	I	A	R	E	L	Q	C	I	N	M	S	S	L	D	A	L	V	S	S	K	L	V	D	C	V	I	V	A	T	P	N	Y	L	H	.	.	.	.	K	E	P	V	I
Query Conservation																																																																									.	.	.	.
Alig confidence																																														.									.	.	.																.	.	.	.
Template Conservation																																														.									.	.	.
Template Sequence		P	A	L	V	L	G	A	G	G	A	G	R	A	V	A	F	A	L	R	E	A	G	L	E	V	W	V	W	N	R	T	P	Q	R	A	L	A	L	A	E	E	F	G	L	.	R	A	V	P	L	E	K	A	.	.	.	R	E	A	R	L	L	V	N	A	T	R	V	G	L	E	D	P	S	A	S	P	L	P	A
Template Known Secondary structure									S													T	T								S	S												T		.					G	G	G	G	.	.	.	G	G		S						S	S	T	T	T	T		T	T			S	S		G
Template Predicted Secondary structure																																														.									.	.	.
Template SS confidence
		118	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.		.	.	.	.	.	.	.	.				170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.
		79	80	.	.	.	.	.	.	.	.			.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130
Predicted Secondary structure												.	.
Query SS confidence												.	.
Query Sequence		K	A	A	K	N	K	K	H	V	F	.	.	C	E	K	P	I	A	L	S	Y	E	D	C	V	D	M	V	K	A	C	K	E	A	G	V	T	F	M	A	G	H	I	M	N	F	F	N	G	V	Q	Y	A	R
Query Conservation												.	.
Alig confidence												.	.							.	.	.	.	.	.
Template Conservation																				.	.	.	.	.	.
Template Sequence		E	L	F	P	E	E	G	A	A	V	D	L	V	Y	R	P	L	W	.	.	.	.	.	.	T	R	F	L	R	E	A	K	A	K	G	L	K	V	Q	T	G	L	P	M	L	A	W	Q	G	A	L	A	F	R
Template Known Secondary structure		G	G			S	S						S			S	S	S	S	.	.	.	.	.	.										T	T						S
Template Predicted Secondary structure																				.	.	.	.	.	.
Template SS confidence
		194	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.							.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions