 |
Job Description | P39353 | Confidence | 95.94% | Date | Thu Jan 5 11:59:42 GMT 2012 |
Rank | 345 | Aligned Residues | 65 |
% Identity | 15% | Template | c2eezG_ |
PDB info |
PDB header:oxidoreductase | Chain: G: PDB Molecule:alanine dehydrogenase; |
PDBTitle: crystal structure of alanine dehydrogenase from themus thermophilus
|
Resolution | 2.71 Å |
|
 |
  |   |
3 | . | . | . | . | . | . | 10 | . | . | . | . | . | . | . | . | . | 20 | . | . | . | . | . | . | . | . | . | 30 | . | . | |
. | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | |
|
|
|
|
|
50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 |
Predicted Secondary structure |   |
 |  |  |  |  |
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  | . |
|  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  | . | . | . | . | . | . |
|
|  |  |  |  |  |
|
|
|
|
|
|  |  |  |  |  |
|
|
|
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
. |
. |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
N | Y | G | V | V | G | V | G | Y | F | G | A | E | L | A | R | F | M | N | M | H | D | N | A | K | I | T | C | V | Y | . |
D | P | E | N | G | E | N | I | A | R | E | L | Q | C | I | N | M | . |
. |
. |
. |
. |
. |
S | S | L | D | A | L | V | S | S | K | L | V | D | C | V | I | V | A | T | P | N |
Query Conservation |   |
|
|
|
|
|
|   |
|   |   |
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|
|
|
|   | . |
|   |   |   |
|   |   |   |
|   |   |   |   |   |   |   |
| . | . | . | . | . | . |   |   |   |   |
|
|
|   |   |   |   |
|
|   |
|   |
|   |
|
|   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . |
|
|
|
|
|
|
|
|
| . | . |
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |
|   |
|
|
|   |
|   |
|
|   |   |   |
|   |   |   |   |   |   | . |
|   |   |
|   |   |   |
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|   |   |   |   |   |   | . | . |   |
|
|
|
|   |   |   |   |   |
Template Sequence |   |
S | V | V | I | L | G | G | G | T | V | G | T | N | A | A | K | I | A | L | G | M | . |
G | A | Q | V | T | I | L | D | V | N | H | K | R | L | Q | Y | L | D | D | V | F | G | G | R | V | I | T | L | T | A | T | E | A | N | I | K | K | S | V | Q | H | . |
. |
A | D | L | L | I | G | A | V | L | K |
Template Known Secondary structure |   |
 |  |  |  |  |
|
| S |  |  |  |  |  |  |  |  |  |  |  |  | T | . | T |
|  |  |  |  |  |  | S |
|  |  |  |  |  |  |  |  |  |  | T | T | T |
| S |  |  |  |  |
|
|  |  |  |  |  |  |  |  |  | T | . | . |
| S |  |  |  |  |
|
|
|
|
Template Predicted Secondary structure |   |
 |  |  |  |  |
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |
| . |
|
|  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  | . | . |
|
|  |  |  |  |
|
|
|
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
168 | . | 170 | . | . | . | . | . | . | . | . | . | 180 | . | . | . | . | . | . | . | . | |
. | 190 | . | . | . | . | . | . | . | . | . | 200 | . | . | . | . | . | . | . | . | . | 210 | . | . | . | . | . | . | . | . | . | 220 | . | . | . | . | . | . | . | . | . | |
|
230 | . | . | . | . | . | . | . | . | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|