Job Description P39353 Confidence 99.23% Date Thu Jan 5 11:59:42 GMT 2012 Rank 75 Aligned Residues 97 % Identity 18% Template c2dt5A_ PDB info PDB header:dna binding protein Chain: A: PDB Molecule:at-rich dna-binding protein; PDBTitle: crystal structure of ttha1657 (at-rich dna-binding protein) from2 thermus thermophilus hb8 Resolution 2.16 Å

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		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.			.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																																		.	.
Query SS confidence																																		.	.
Query Sequence		I	N	Y	G	V	V	G	V	G	Y	F	G	A	E	L	A	R	F	M	N	M	H	D	N	A	K	I	T	C	V	Y	D	.	.	P	E	N	G	E	N	I	A	R	E	L	Q	C	I	N	M	S	S	L	D	A	L	V	S	S	K	L	V	D	C	V	I	V	A	T	P	N	Y	L	H	K	E	P	V	I	K
Query Conservation																																		.	.
Alig confidence																																		.	.																										.
Template Conservation																																																													.
Template Sequence		W	G	L	C	I	V	G	M	G	R	L	G	S	A	L	A	D	Y	P	G	F	G	E	S	F	E	L	R	G	F	F	D	V	D	P	E	K	V	G	R	P	V	R	G	G	V	I	E	H	V	D	L	L	P	Q	R	V	P	G	.	R	I	E	I	A	L	L	T	V	P	R	E	A	A	Q	K	A	A	D	L
Template Known Secondary structure										S										S				S	S									S		T	T	T	T	T				T	T						G	G	G					S	T	T	.	T								S
Template Predicted Secondary structure																																																													.
Template SS confidence
		81	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.		140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.
		80	.	.	.	.		.	.	.	.	.	90	.	.	.	.	.	.	.	.	.
Predicted Secondary structure							.
Query SS confidence							.
Query Sequence		A	A	K	N	K	.	K	H	V	F	C	E	K	P	I	A	L	S	Y	E	D
Query Conservation							.
Alig confidence							.
Template Conservation
Template Sequence		L	V	A	A	G	I	K	G	I	L	N	F	A	P	V	V	L	E	V	P	K
Template Known Secondary structure						T								S	S	S						T
Template Predicted Secondary structure
Template SS confidence
		160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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