Job Description P39353 Confidence 100.00% Date Thu Jan 5 11:59:42 GMT 2012 Rank 32 Aligned Residues 309 % Identity 24% Template c1zh8B_ PDB info PDB header:oxidoreductase Chain: B: PDB Molecule:oxidoreductase; PDBTitle: crystal structure of oxidoreductase (tm0312) from thermotoga maritima2 at 2.50 a resolution Resolution 2.50 Å

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		2	.	.	.	.	.	.	.	10	.	.	.	.	.		.	.	.	.	20	.	.	.	.	.		.	.	.	.	30	.	.	.			.	.	.	.	.	.	40	.	.	.	.	.	.	.		.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.
Predicted Secondary structure																.											.									.	.															.
Query SS confidence																.											.									.	.															.
Query Sequence		I	N	Y	G	V	V	G	V	G	Y	F	G	A	E	.	L	A	R	F	M	N	M	H	D	N	.	A	K	I	T	C	V	Y	D	.	.	P	E	N	G	E	N	I	A	R	E	L	Q	C	I	.	N	M	S	S	L	D	A	L	V	S	S	K	L	V	D	C	V	I	V	A	T	P	N	Y	L	H	K	E	P
Query Conservation																.											.									.	.															.
Alig confidence																.											.									.	.															.
Template Conservation
Template Sequence		I	R	L	G	I	V	G	C	G	I	A	A	R	E	L	H	L	P	A	L	K	N	L	S	H	L	F	E	I	T	A	V	T	S	R	T	R	S	H	A	E	E	F	A	K	X	V	G	N	P	A	V	F	D	S	Y	E	E	L	L	E	S	G	L	V	D	A	V	D	L	T	L	P	V	E	L	N	L	P	F
Template Known Secondary structure										S						T							T	T	T	T	T									S	S												S	S					S							T	T	T			S								G	G	G
Template Predicted Secondary structure
Template SS confidence
		7	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.
		77	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		V	I	K	A	A	K	N	K	K	H	V	F	C	E	K	P	I	A	L	S	Y	E	D	C	V	D	M	V	K	A	C	K	E	A	G	V	T	F	M	A	G	H	I	M	N	F	F	N	G	V	Q	Y	A	R	K	L	I	K	E	G	V	I	G	E	I	L	S	C	H	T	K	R	N	G	W	E	N	K	Q	E
Query Conservation
Alig confidence
Template Conservation
Template Sequence		I	E	K	A	L	R	K	G	V	H	V	I	C	E	K	P	I	S	T	D	V	E	T	G	K	K	V	V	E	L	S	E	K	S	E	K	T	V	Y	I	A	E	N	F	R	H	V	P	A	F	W	K	A	K	E	L	V	E	S	G	A	I	G	D	P	V	F	X	N	W	Q	I	W	V	G	X	D	E	N	N
Template Known Secondary structure							T	T	T							S	S	S	S	S	S														S	S	S							G	G	G	G													T	T	T	T	S	S										B				T	T
Template Predicted Secondary structure
Template SS confidence
		87	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.
		157	.				.	160	.	.	.	.	.	.	.	.	.	170	.		.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.
Predicted Secondary structure				.	.	.														.
Query SS confidence				.	.	.														.
Query Sequence		R	L	.	.	.	S	W	K	K	M	K	E	Q	S	G	G	H	L	.	Y	H	H	I	H	E	L	D	C	V	Q	H	L	L	G	E	I	P	E	T	V	T	M	I	G	G	N	L	A	H	S	G	P	G	F	G	N	E	D	D	M	L	F	M	T	L	E	F	P	S	G	K	L	A	T	L	E	W	G	S	A
Query Conservation				.	.	.														.
Alig confidence				.	.	.														.																	.																.	.	.	.
Template Conservation																																					.																.	.	.	.
Template Sequence		K	Y	V	H	T	D	W	R	K	K	P	K	H	V	G	G	F	L	S	D	G	G	V	H	H	A	A	A	X	R	L	I	L	G	E	.	I	E	W	I	S	A	V	A	K	D	L	S	P	L	L	.	.	.	.	G	G	X	D	F	L	S	S	I	F	E	F	E	N	G	T	V	G	N	Y	T	I	S	Y	S
Template Known Secondary structure		S	G	G	G						T	T		S	T	T	T																				.													S	S	S	.	.	.	.	S	S											T	T	S									S	S
Template Predicted Secondary structure																																					.																.	.	.	.
Template SS confidence
		167	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.		.	.	.	.	.	.	.	.	210	.	.	.	.	.	.					.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.
		233	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		F	N	W	P	E	H	Y	V	I	I	N	G	T	K	G	S	I	K	I	D	M	Q	E	T	A	G	S	L	R	I	G	G	Q	T	K	H	F	L	V	H	E	T	Q	E	E	D	D	D	R	R	K	G	N	M	T	S	E	M	D	G	A	I	A	Y	G	H	P	G	K	K	T	P	L	W	L	A	S	L	I	R
Query Conservation
Alig confidence								.																														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation								.																														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		L	K	G	N	E	R	.	F	E	I	T	G	T	K	G	K	I	S	I	S	W	D	K	I	V	L	N	E	E	E	X	K	V	P	Q	E	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	N	S	Y	Q	K
Template Known Secondary structure			B					.						S	S							T	T					T	T									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure								.																														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		242	.	.	.	.	.		.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.																																								.	.	.	280	.
		313	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360
Predicted Secondary structure
Query SS confidence
Query Sequence		K	E	T	L	F	L	H	N	I	L	C	G	A	K	P	E	E	D	Y	I	D	L	L	N	G	E	A	A	M	S	A	I	A	T	A	D	A	A	T	L	S	R	S	Q	D	R	K	V
Query Conservation
Alig confidence																	.	.	.	.	.
Template Conservation																	.	.	.	.	.
Template Sequence		E	F	E	D	F	Y	Q	V	V	A	E	G	K	P	N	.	.	.	.	.	D	L	G	S	P	V	Q	A	L	K	D	L	A	F	I	E	A	C	V	R	S	A	G	N	K	V	F	V
Template Known Secondary structure											T	T					.	.	.	.	.	S	S	S																			T	T	S				G
Template Predicted Secondary structure																	.	.	.	.	.
Template SS confidence
		282	.	.	.	.	.	.	.	290	.	.	.	.	.	.						.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions