Return to main results Retrieve Phyre Job Id

Job DescriptionP39353
Confidence97.05%DateThu Jan 5 11:59:42 GMT 2012
Rank256Aligned Residues77
% Identity12%Templatec1yj8C_
PDB info PDB header:oxidoreductaseChain: C: PDB Molecule:glycerol-3-phosphate dehydrogenase; PDBTitle: initial structural analysis of plasmodium falciparum glycerol-3-2 phosphate dehydrogenase
Resolution2.85 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   2.......10.........20... ......30.. .......40... ......50.........
Predicted Secondary structure 



........


.
.............








Query SS confidence 





















. . . . . . . .








.










. . . . . . . . . . . . .















Query Sequence  INYGVVGVGYFGAELARFMNMH. . . . . . . . DNAKITCVY. DPENGENIARE. . . . . . . . . . . . . LQCINMSSLDALVSSK
Query Conservation 






 
  
          ........    



 .
   
   
  .............     
    


   
Alig confidence 





















........








.










.............














.
Template Conservation 


 




 

   
  
   
  
      
              
   
              
       
    .
Template Sequence  LKISILGSGNWASAISKVVGTNAKNNYLFENEVRMWIRDEFERMVDIINNKHENTKYLKGVPLPHNIVAHSDLASVIND.
Template Known Secondary structure  B


S
TTB
S


S




B
TTTSTT
B

TTSSSTT.
Template Predicted Secondary structure 





































.
Template SS confidence 















































































   22.......30.........40.........50.........60.........70.........80.........90.........100
 
   60.........70.........80
Predicted Secondary structure 





Query SS confidence 




















Query Sequence  LVDCVIVATPNYLHKEPVIKA
Query Conservation   

 
 
 

   
      
Alig confidence  .



















Template Conservation  . 
 


 
 
      
  
Template Sequence  . ADLLIFIVPCQYLESVLASI
Template Known Secondary structure  .
S


Template Predicted Secondary structure  .


Template SS confidence 




















   104.....110.........120...
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions