Job Description P39353 Confidence 100.00% Date Thu Jan 5 11:59:42 GMT 2012 Rank 37 Aligned Residues 302 % Identity 13% Template c1xeaD_ PDB info PDB header:oxidoreductase Chain: D: PDB Molecule:oxidoreductase, gfo/idh/moca family; PDBTitle: crystal structure of a gfo/idh/moca family oxidoreductase2 from vibrio cholerae Resolution 2.65 Å

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		2	.	.	.	.	.	.	.	10	.	.	.	.	.		.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.			.	.	.	.	.	.	40	.	.	.	.	.	.	.		.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.
Predicted Secondary structure																.																			.	.															.
Query SS confidence																.																			.	.															.
Query Sequence		I	N	Y	G	V	V	G	V	G	Y	F	G	A	E	.	L	A	R	F	M	N	M	H	D	N	A	K	I	T	C	V	Y	D	.	.	P	E	N	G	E	N	I	A	R	E	L	Q	C	I	.	N	M	S	S	L	D	A	L	V	S	S	K	L	V	D	C	V	I	V	A	T	P	N	Y	L	H	K	E	P	V
Query Conservation																.																			.	.															.
Alig confidence																.															.				.	.															.													.
Template Conservation																															.																																	.
Template Sequence		L	K	I	A	X	I	G	L	G	D	I	A	Q	K	A	Y	L	P	V	L	A	Q	W	P	D	I	E	L	V	.	L	C	T	R	N	P	K	V	L	G	T	L	A	T	R	Y	R	V	S	A	T	C	T	D	Y	R	D	V	L	Q	Y	G	.	V	D	A	V	X	I	H	A	A	T	D	V	H	S	T	L	A
Template Known Secondary structure																T							S		T	T					.				S												T	T						S	S	G	G	G	G	G	G	G		.		S						S		G	G	G
Template Predicted Secondary structure																															.																																	.
Template SS confidence
		3	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.		.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.		.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80
		78	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		I	K	A	A	K	N	K	K	H	V	F	C	E	K	P	I	A	L	S	Y	E	D	C	V	D	M	V	K	A	C	K	E	A	G	V	T	F	M	A	G	H	I	M	N	F	F	N	G	V	Q	Y	A	R	K	L	I	K	E	G	V	I	G	E	I	L	S	C	H	T	K	R	N	G	W	E	N	K	Q	E	R
Query Conservation
Alig confidence																																																																															.	.	.
Template Conservation																																																																															.	.	.
Template Sequence		A	F	F	L	H	L	G	I	P	T	F	V	D	K	P	L	A	A	S	A	Q	E	C	E	N	L	Y	E	L	A	E	K	H	H	Q	P	L	Y	V	G	F	N	R	R	H	I	P	L	Y	N	Q	H	L	S	E	L	A	Q	Q	E	C	G	A	L	R	S	L	R	W	E	K	H	R	H	A	L	P	.	.	.
Template Known Secondary structure						T	T	T							S	S	S	S	S	S													T	T	T								G	G	G															T	S		T	T		S									B	S			.	.	.
Template Predicted Secondary structure																																																																															.	.	.
Template SS confidence
		81	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.
		158	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	S	W	K	K	M	K	E	Q	S	G	G	H	L	Y	H	H	I	H	E	L	D	C	V	Q	H	L	L	G	E	I	P	E	T	V	T	M	I	G	G	N	L	A	H	S	G	P	G	F	G	N	E	D	D	M	L	F	M	T	L	E	F	P	S	G	K	L	A	T	L	E	W	G	S	A	F	N	W	P	E
Query Conservation
Alig confidence		.	.	.	.	.	.																																					.	.	.	.	.	.	.														.
Template Conservation		.	.	.	.	.	.																																					.	.	.	.	.	.	.														.
Template Sequence		.	.	.	.	.	.	G	D	I	R	T	F	V	F	D	D	F	I	H	P	L	D	S	V	N	L	S	R	Q	C	N	L	D	D	L	H	L	T	Y	H	X	S	.	.	.	.	.	.	.	E	G	L	L	A	R	L	D	V	Q	W	Q	T	.	G	D	T	L	L	H	A	S	X	N	R	Q	F	G	I	T	T
Template Known Secondary structure		.	.	.	.	.	.	B									T	T										S				S		T	T									.	.	.	.	.	.	.	T	T												.	T	T									T	T	B	S	S
Template Predicted Secondary structure		.	.	.	.	.	.																																					.	.	.	.	.	.	.														.
Template SS confidence
								158	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.								.	.	.	.	.	.	200	.	.	.	.	.	.		.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.
		238	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		H	Y	V	I	I	N	G	T	K	G	S	I	K	I	D	M	Q	E	T	A	G	S	L	R	I	G	G	Q	T	K	H	F	L	V	H	E	T	Q	E	E	D	D	D	R	R	K	G	N	M	T	S	E	M	D	G	A	I	A	Y	G	H	P	G	K	K	T	P	L	W	L	A	S	L	I	R	K	E	T	L	F
Query Conservation
Alig confidence																																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		E	H	V	T	A	S	Y	D	N	V	A	Y	L	F	D	S	F	T	Q	G	K	X	W	R	D	N	Q	E	S	R	V	A	L	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	K	D	W	T	P	X	L	A	S	K	G	F	D	A	X	V	Q	D	W
Template Known Secondary structure									S	S						S	S	S	S							T	T								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.		T	T							T	T
Template Predicted Secondary structure																																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		224	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.																													.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.
		318	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	H	N	I	L	C	G	A	K	P	E	E	D	Y	I	D	L	L	N	G	E	A	A	M	S	A	I	A	T	A	D	A	A	T	L	S	R	S	Q
Query Conservation
Alig confidence												.	.	.	.	.	.
Template Conservation												.	.	.	.	.	.
Template Sequence		L	Q	V	A	A	A	G	K	L	P	.	.	.	.	.	.	T	H	I	I	E	R	N	L	A	S	H	Q	L	A	E	A	I	C	Q	Q	I	T	Q
Template Known Secondary structure								T				.	.	.	.	.	.
Template Predicted Secondary structure												.	.	.	.	.	.
Template SS confidence
		276	.	.	.	280	.	.	.	.	.							.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions