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Job DescriptionP39353
Confidence97.36%DateThu Jan 5 11:59:42 GMT 2012
Rank221Aligned Residues91
% Identity21%Templatec1obfO_
PDB info PDB header:glycolytic pathwayChain: O: PDB Molecule:glyceraldehyde 3-phosphate dehydrogenase; PDBTitle: the crystal structure of glyceraldehyde 3-phosphate2 dehydrogenase from alcaligenes xylosoxidans at 1.73 resolution.
Resolution1.7 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   2.......10.........20.. .......30.........40..... ....50.
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Query Sequence  INYGVVGVGYFGAELARFMNM. . . HDNAKITCVYDPENGENIARELQ. . . . . . . . . . . . . . . . . . . . . . . . . . . CINMSS
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Template Sequence  IRVAINGYGRIGRNILRAHYEGGKSHDIEIVAINDLGDPKTNAHLTRYDTAHGKFPGTVSVNGSYMVVNGDKIRVDANRN
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   2.......10.........20.........30.........40.........50.........60.........70.........80.
 
   52....... 60.........70.........80.... .....90..
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Query Sequence  LDALVSSK. LVDCVIVATPNYLHKEPVIKAAKNK. KHVFCEKP
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Template Sequence  PAQLPWGALKVDVVLECTGFFTTKEKAGAHIKGGAKKVIISAP
Template Known Secondary structure  GGGS
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   82.......90.........100.........110.........120....
 
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No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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