Job Description P39353 Confidence 95.75% Date Thu Jan 5 11:59:42 GMT 2012 Rank 358 Aligned Residues 118 % Identity 14% Template c1npyA_ PDB info PDB header:structural genomics, unknown function Chain: A: PDB Molecule:hypothetical shikimate 5-dehydrogenase-like PDBTitle: structure of shikimate 5-dehydrogenase-like protein hi0607 Resolution 1.75 Å

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		3	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.		.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.								.
Predicted Secondary structure																												.																																														.	.	.	.	.	.	.
Query SS confidence																												.																																														.	.	.	.	.	.	.
Query Sequence		N	Y	G	V	V	G	V	G	Y	F	G	A	E	L	A	R	F	M	N	M	H	D	N	A	K	I	.	T	C	V	Y	D	P	E	N	G	E	N	I	A	R	E	L	Q	C	I	N	M	S	S	L	D	A	L	V	S	S	K	L	V	D	C	V	I	V	A	T	P	N	Y	L	H	.	.	.	.	.	.	.	K
Query Conservation																												.																																														.	.	.	.	.	.	.
Alig confidence																												.																										.	.	.	.																	.	.	.	.	.	.	.
Template Conservation																																																						.	.	.	.
Template Sequence		K	V	I	V	H	G	S	G	G	M	A	K	A	V	V	A	A	F	K	N	S	G	F	E	K	L	K	I	Y	A	R	N	V	K	T	G	Q	Y	L	A	A	L	Y	G	Y	A	Y	I	N	S	L	E	.	.	.	.	N	Q	Q	A	D	I	L	V	N	V	T	S	I	G	M	K	G	G	K	E	E	M	D	L
Template Known Secondary structure								S	S	T	T											T	T									S													T					S			T	.	.	.	.	T				S						S	S	T	T		T	T	S	T	T	T	T	S
Template Predicted Secondary structure																																																						.	.	.	.
Template SS confidence
		121	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.					.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.
		75	.	.	.	.	80	.	.	.	.	.	.	.	.			.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130
Predicted Secondary structure																.	.
Query SS confidence																.	.
Query Sequence		E	P	V	I	K	A	A	K	N	K	K	H	V	F	.	.	C	E	K	P	I	A	L	S	Y	E	D	C	V	D	M	V	K	A	C	K	E	A	G	V	T	F	M	A	G	H	I	M	N	F	F	N	G	V	Q	Y	A	R
Query Conservation																.	.
Alig confidence																.	.									.	.	.	.	.	.
Template Conservation																										.	.	.	.	.	.
Template Sequence		A	F	P	K	A	F	I	D	N	A	S	V	A	F	D	V	V	A	M	P	V	E	T	P	.	.	.	.	.	.	F	I	R	Y	A	Q	A	R	G	K	Q	T	I	S	G	A	A	V	I	V	L	Q	A	V	E	Q	F	E
Template Known Secondary structure		S	S									S								S	S	S	S			.	.	.	.	.	.								T	T
Template Predicted Secondary structure																										.	.	.	.	.	.
Template SS confidence
		197	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220							.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions