Job Description P39353 Confidence 97.68% Date Thu Jan 5 11:59:42 GMT 2012 Rank 173 Aligned Residues 120 % Identity 14% Template c1mv8A_ PDB info PDB header:oxidoreductase Chain: A: PDB Molecule:gdp-mannose 6-dehydrogenase; PDBTitle: 1.55 a crystal structure of a ternary complex of gdp-mannose2 dehydrogenase from psuedomonas aeruginosa Resolution 1.55 Å

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		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.		.	.	.	.	.	.	.	.	40																				.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.
Predicted Secondary structure																																.										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																.										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		I	N	Y	G	V	V	G	V	G	Y	F	G	A	E	L	A	R	F	M	N	M	H	D	N	A	K	I	T	C	V	.	Y	D	P	E	N	G	E	N	I	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	A	R	E	L	Q	C	I	N	M	S	S	L	D	A	L	V	S	S	K	L	V
Query Conservation																																.										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																								.								.										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																			.	.
Template Conservation																								.																																																							.	.
Template Sequence		M	R	I	S	I	F	G	L	G	Y	V	G	A	V	C	A	G	C	L	S	A	R	.	G	H	E	V	I	G	V	D	V	S	S	T	K	I	D	L	I	N	Q	G	K	S	P	I	V	E	P	G	L	E	A	L	L	Q	Q	G	R	Q	T	G	R	L	S	G	T	T	D	F	K	K	A	V	L	D	.	.	S
Template Known Secondary structure										S	T	T											T	.	T								S										T	T			S	S			T	T											T	T						S								T	.	.
Template Predicted Secondary structure																								.																																																							.	.
Template SS confidence
		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.		.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.			.
		62	.	.	.	.	.	.	.	70														.	.	.	.	.	.	.	.	.	80	.	.	.	.	.				.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.
Predicted Secondary structure											.	.	.	.	.	.	.	.	.	.	.	.	.																.	.	.
Query SS confidence											.	.	.	.	.	.	.	.	.	.	.	.	.																.	.	.
Query Sequence		D	C	V	I	V	A	T	P	N	.	.	.	.	.	.	.	.	.	.	.	.	.	Y	L	H	K	E	P	V	I	K	A	A	K	N	K	K	.	.	.	H	V	F	C	E	K	P	I	A	L	S	Y	E	D	C	V	D	M	V	K	A	C	K	E	A	G	V	T	F	M	A	G	H	I	M	N	F	F	N
Query Conservation											.	.	.	.	.	.	.	.	.	.	.	.	.																.	.	.
Alig confidence											.	.	.	.	.	.	.	.	.	.	.	.	.																.	.	.
Template Conservation
Template Sequence		D	V	S	F	I	C	V	G	T	P	S	K	K	N	G	D	L	D	L	G	Y	I	E	T	V	C	R	E	I	G	F	A	I	R	E	K	S	E	R	H	T	V	V	V	R	S	T	V	L	P	G	T	V	N	N	V	V	I	P	L	I	E	D	C	S	G	K	K	A	G	V	D	F	G	V	G	T	N	P
Template Known Secondary structure		S										B		T	T	S	S	B																	T	T			S								S				T	T					T										S			B	T	T	T	B
Template Predicted Secondary structure
Template SS confidence
		78	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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