Return to main results Retrieve Phyre Job Id

Job DescriptionP39353
Confidence97.56%DateThu Jan 5 11:59:42 GMT 2012
Rank197Aligned Residues117
% Identity16%Templatec1bg6A_
PDB info PDB header:oxidoreductaseChain: A: PDB Molecule:n-(1-d-carboxylethyl)-l-norvaline dehydrogenase; PDBTitle: crystal structure of the n-(1-d-carboxylethyl)-l-norvaline2 dehydrogenase from arthrobacter sp. strain 1c
Resolution1.80 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   3......10.........20.........30.. .......40......... 50.........60.......
Predicted Secondary structure 






.




..............







Query SS confidence 





























.
















. . . . . . . . . . . . . .

















Query Sequence  NYGVVGVGYFGAELARFMNMHDNAKITCVY. DPENGENIARELQCINM. . . . . . . . . . . . . . SSLDALVSSKLVDCVIVA
Query Conservation 





 
  
              



 .
   
   
       
..............    


    

 
 
 
Alig confidence 




















.







.
















..............








..






Template Conservation    



 
  
   
  

  .
  
    
       
   
                  
     
   .. 
 


 
Template Sequence  TYAVLGLGNGGHAFAAYLALK. GQSVLAWDIDAQRIKEIQDRGAIIAEGPGLAGTAHPDLLTSDIGLAVKD. . ADVILIV
Template Known Secondary structure 

ST.T

S
TSSSS



SS
TT..
S
Template Predicted Secondary structure 



.
























..

Template SS confidence 















































































   6...10.........20...... ...30.........40.........50.........60.........70..... ....80..
 
   68.70.........80... ......90.........100.........110.........120..
Predicted Secondary structure 


...




















Query SS confidence 















. . .






































Query Sequence  TPNYLHKEPVIKAAKN. . . KKHVFCEKPIALSYEDCVDMVKACKEAGVTFMAGHIMNF
Query Conservation 

   
      

  ...



  


 
 
  
   
   
   
    
    
 
Alig confidence 















...






































Template Conservation 
 
         
         

   

                    
        
Template Sequence  VPAIHHASIAANIASYISEGQLIILNPGATGGALEFRKILRENGAPEVTIGETSSMLF
Template Known Secondary structure  S
GGGGGG

TT
SS

SSTT



SS
S
Template Predicted Secondary structure 
























Template SS confidence 

























































   83......90.........100.........110.........120.........130.........140
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions