Job Description P37387 Confidence 98.22% Date Thu Jan 5 11:55:34 GMT 2012 Rank 85 Aligned Residues 218 % Identity 10% Template d1qo0a_ SCOP info Periplasmic binding protein-like I Periplasmic binding protein-like I L-arabinose binding protein-like Resolution 2.25

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		25	.	.	.	.	30	.	.	.	.	.	.	.			.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.										.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.
Predicted Secondary structure															.	.																	.	.	.	.	.	.	.	.	.
Query SS confidence															.	.																	.	.	.	.	.	.	.	.	.
Query Sequence		E	V	K	I	G	M	A	I	D	D	L	R	L	.	.	E	R	W	Q	K	D	R	D	I	F	V	K	K	A	E	S	.	.	.	.	.	.	.	.	.	L	G	A	K	V	F	V	Q	S	A	N	G	N	E	E	T	Q	M	S	Q	I	E	N	M	I	N	R	G	V	D	V	L	V	I	I	P	Y	N	G	Q
Query Conservation															.	.																	.	.	.	.	.	.	.	.	.
Alig confidence															.	.																	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		R	P	L	I	G	L	L	F	S	E	T	G	V	T	A	D	I	E	R	S	Q	R	Y	G	A	L	L	A	V	E	Q	L	N	R	E	G	G	V	G	G	R	P	I	E	T	L	S	Q	D	P	G	G	D	P	D	R	Y	R	L	C	A	E	D	F	I	R	N	R	G	V	R	F	L	V	G	C	Y	M	S	H
Template Known Secondary structure											S	S	S	T	T																					T	T		B	T	T	B										T	T																S										S
Template Predicted Secondary structure
Template SS confidence
		7	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.
		94	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.			.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.
Predicted Secondary structure																				.	.
Query SS confidence																				.	.
Query Sequence		V	L	S	N	V	V	K	E	A	K	Q	E	G	I	K	V	L	A	.	.	Y	D	R	M	I	N	D	A	D	I	D	F	Y	I	S	F	D	N	E	K	V	G	E	L	Q	A	K	A	L	V	D	I	V	P	Q	G	N	Y	F	L	M	G	G	S	P	V	D	N	N	A	K	L	F	R	A	G	Q	M	K	V
Query Conservation																				.	.
Alig confidence																				.	.																																										.	.	.
Template Conservation																																																															.	.	.
Template Sequence		T	R	K	A	V	M	P	V	V	E	R	A	D	A	L	L	C	Y	P	T	P	Y	E	G	F	E	Y	S	P	N	I	V	Y	G	G	P	A	P	N	Q	N	S	A	P	L	A	A	Y	L	I	R	H	Y	G	E	R	V	V	F	I	G	.	.	.	S	D	Y	I	Y	P	R	E	S	N	H	V	M	R	H	L
Template Known Secondary structure														T							S									T	T					S			G	G	G	T												S		S							.	.	.		S	S
Template Predicted Secondary structure																																																															.	.	.
Template SS confidence
		87	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.				.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.
		172	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250
Predicted Secondary structure
Query SS confidence
Query Sequence		L	K	P	Y	V	D	S	G	K	I	K	V	V	G	D	Q	W	V	D	G	W	L	P	E	N	A	L	K	I	M	E	N	A	L	T	A	N	N	N	K	I	D	A	V	V	A	S	N	D	A	T	A	G	G	A	I	Q	A	L	S	A	Q	G	L	S	G	K	V	A	I	S	G	Q	D	A	D	L	A	G
Query Conservation
Alig confidence							.	.	.	.																																	.
Template Conservation							.	.	.	.																																	.
Template Sequence		Y	R	Q	H	G	.	.	.	.	G	T	V	L	E	E	I	Y	I	P	L	Y	P	S	D	D	D	L	Q	R	A	V	E	R	I	Y	Q	A	R	A	D	V	.	V	F	S	T	V	V	G	T	G	T	A	E	L	Y	R	A	I	A	R	R	Y	G	D	G	R	R	P	P	I	A	S	L	T	T	S	E	A
Template Known Secondary structure				T	T	T	.	.	.	.											S	S																	T		S		.							S	T	T														S	S								S	S
Template Predicted Secondary structure							.	.	.	.																																	.
Template SS confidence
		164	.	.	.	.					.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200		.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions