Job Description P37387 Confidence 91.91% Date Thu Jan 5 11:55:34 GMT 2012 Rank 105 Aligned Residues 214 % Identity 10% Template d1dp4a_ SCOP info Periplasmic binding protein-like I Periplasmic binding protein-like I L-arabinose binding protein-like Resolution 2.00

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		25	.	.	.	.	30	.	.	.	.	.	.	.	.	.				40	.	.	.	.	.	.	.	.	.	50	.	.	.	.									.	.	.	.			.	60	.	.	.	.	.						.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.
Predicted Secondary structure																	.	.	.																.	.	.	.	.	.	.	.					.	.								.	.	.	.	.
Query SS confidence																	.	.	.																.	.	.	.	.	.	.	.					.	.								.	.	.	.	.
Query Sequence		E	V	K	I	G	M	A	I	D	D	L	R	L	E	R	.	.	.	W	Q	K	D	R	D	I	F	V	K	K	A	E	S	L	.	.	.	.	.	.	.	.	G	A	K	V	.	.	F	V	Q	S	A	N	G	.	.	.	.	.	N	E	E	T	Q	M	S	Q	I	E	N	M	I	N	R	G	V	D	V	L	V
Query Conservation																	.	.	.																.	.	.	.	.	.	.	.					.	.								.	.	.	.	.
Alig confidence																	.	.	.																.	.	.	.	.	.	.	.					.	.								.	.	.	.	.
Template Conservation
Template Sequence		D	L	T	V	A	V	V	L	P	L	T	N	T	S	Y	P	W	S	W	A	R	V	G	P	A	V	E	L	A	L	A	R	V	K	A	R	P	D	L	L	P	G	W	T	V	R	M	V	L	G	S	S	E	N	A	A	G	V	C	S	D	T	A	A	P	L	A	A	V	D	L	K	W	E	H	S	P	A	V	F
Template Known Secondary structure											S	S				S	T	T																		T		T	T	S	S	T	T											B		T	T	S	S	B		T	T																S
Template Predicted Secondary structure
Template SS confidence
		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.
		87	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.						.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.
Predicted Secondary structure																														.	.	.	.	.
Query SS confidence																														.	.	.	.	.
Query Sequence		I	I	P	Y	N	G	Q	V	L	S	N	V	V	K	E	A	K	Q	E	G	I	K	V	L	A	Y	D	R	.	.	.	.	.	M	I	N	D	A	D	I	D	F	Y	I	S	F	D	N	E	K	V	G	E	L	Q	A	K	A	L	V	D	I	V	P	Q	G	N	Y	F	L	M	G	G	S	P	V	D	N	N	A
Query Conservation																														.	.	.	.	.
Alig confidence																														.	.	.	.	.
Template Conservation
Template Sequence		L	G	P	G	C	V	Y	S	A	A	P	V	G	R	F	T	A	H	W	R	V	P	L	L	T	A	G	A	P	A	L	G	I	G	V	K	D	E	Y	A	L	T	T	R	T	G	P	S	H	V	K	L	G	D	F	V	T	A	L	H	R	R	L	G	W	E	H	Q	A	L	V	L	Y	A	D	R	L	G	D	D
Template Known Secondary structure						S															T						S					G	G	G	G		T	T	T	S	T	T					S																		T			S										S	S	S
Template Predicted Secondary structure
Template SS confidence
		82	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.
		162	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.
Predicted Secondary structure
Query SS confidence
Query Sequence		K	L	F	R	A	G	Q	M	K	V	L	K	P	Y	V	D	S	G	K	I	K	V	V	G	D	Q	W	V	D	G	W	L	P	E	N	A	L	K	I	M	E	N	A	L	T	A	N	N	N	K	I	D	A	V	V	A	S	N	D	A	T	A	G	G	A	I	Q	A	L	S	A	Q	G	L	S	G	K	V	A	I
Query Conservation
Alig confidence																																															.	.	.	.
Template Conservation																																															.	.	.	.
Template Sequence		R	P	C	F	F	I	V	E	G	L	Y	M	R	V	R	E	R	L	N	I	T	V	N	H	Q	E	F	V	E	G	D	P	D	H	Y	P	K	L	L	R	A	V	R	R	K	.	.	.	.	G	R	V	I	Y	I	C	S	S	P	D	A	F	R	N	L	M	L	L	A	L	N	A	G	L	T	G	E	D	Y	V
Template Known Secondary structure																														T	T		G	G	G												.	.	.	.		S						S															T	T			T	T	T
Template Predicted Secondary structure																																															.	.	.	.
Template SS confidence
		162	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.					.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.
		242
Predicted Secondary structure
Query SS confidence
Query Sequence		S
Query Conservation
Alig confidence
Template Conservation
Template Sequence		F
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		238

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions