Job Description P37387 Confidence 98.60% Date Thu Jan 5 11:55:34 GMT 2012 Rank 74 Aligned Residues 224 % Identity 11% Template c3sg0A_ PDB info PDB header:signaling protein Chain: A: PDB Molecule:extracellular ligand-binding receptor; PDBTitle: the crystal structure of an extracellular ligand-binding receptor from2 rhodopseudomonas palustris haa2 Resolution 1.20 Å

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		23	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.				.	.	.	.	.	.	.	.	50	.	.	.	.	.				.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.
Predicted Secondary structure																					.	.	.															.	.	.
Query SS confidence																					.	.	.															.	.	.
Query Sequence		A	K	E	V	K	I	G	M	A	I	D	D	L	R	L	E	R	W	Q	.	.	.	K	D	R	D	I	F	V	K	K	A	E	S	L	G	.	.	.	A	K	V	F	V	Q	S	A	N	G	N	E	E	T	Q	M	S	Q	I	E	N	M	I	N	R	G	V	D	V	L	V	I	I	P	Y	N	G	Q	V	L	S
Query Conservation																					.	.	.															.	.	.
Alig confidence													.								.	.	.															.	.	.
Template Conservation													.
Template Sequence		Q	A	E	I	K	I	G	I	T	X	S	.	A	S	G	P	G	A	A	L	G	Q	P	Q	S	K	T	V	A	A	L	P	K	E	I	G	G	E	K	V	T	Y	F	A	L	D	D	E	S	D	P	T	K	A	A	Q	N	A	R	K	L	L	S	E	E	K	V	D	V	L	I	G	S	S	L	T	P	V	S	L
Template Known Secondary structure													.		S	S	T	T											G	G	G	S		S			T	T											T	T															T	S			S						S	S
Template Predicted Secondary structure													.
Template SS confidence
		22	.	.	.	.	.	.	.	30	.	.		.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100
		97	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.							.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170
Predicted Secondary structure																						.	.	.	.	.	.
Query SS confidence																						.	.	.	.	.	.
Query Sequence		N	V	V	K	E	A	K	Q	E	G	I	K	V	L	A	Y	D	R	M	I	.	.	.	.	.	.	N	D	A	D	I	D	F	Y	I	S	F	D	N	E	K	V	G	E	L	Q	A	K	A	L	V	D	I	V	P	Q	G	N	Y	F	L	M	G	G	S	P	V	D	N	N	A	K	L	F	R	A	G	Q	M	K
Query Conservation																						.	.	.	.	.	.
Alig confidence																						.	.	.	.	.	.																																							.	.
Template Conservation																																																																		.	.
Template Sequence		P	L	I	D	I	A	A	E	A	K	T	P	L	X	T	X	A	A	A	A	I	L	V	A	P	X	D	E	R	R	K	W	V	Y	K	V	V	P	N	D	D	I	X	A	E	A	I	G	K	Y	I	A	K	T	G	A	K	K	V	G	Y	I	G	F	.	.	S	D	A	Y	G	E	G	Y	Y	K	V	L	A	A
Template Known Secondary structure										T	T										G	G	G	T		S			T	T	G	G	G					S																	T	T										.	.	S	S
Template Predicted Secondary structure																																																																		.	.
Template SS confidence
		101	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.			.	.	.	.	.	170	.	.	.	.	.	.	.	.
		171	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250
Predicted Secondary structure
Query SS confidence
Query Sequence		V	L	K	P	Y	V	D	S	G	K	I	K	V	V	G	D	Q	W	V	D	G	W	L	P	E	N	A	L	K	I	M	E	N	A	L	T	A	N	N	N	K	I	D	A	V	V	A	S	N	D	A	T	A	G	G	A	I	Q	A	L	S	A	Q	G	L	S	G	K	V	A	I	S	G	Q	D	A	D	L	A	G
Query Conservation
Alig confidence																							.	.	.	.	.	.																												.
Template Conservation																							.	.	.	.	.	.																												.
Template Sequence		A	A	P	K	L	G	F	E	L	T	T	H	E	V	Y	A	R	S	D	A	S	.	.	.	.	.	.	V	T	G	Q	V	L	K	I	I	A	T	K	P	D	A	V	F	I	A	S	A	G	T	P	A	V	L	.	P	Q	K	A	L	R	E	R	G	F	K	G	A	I	Y	Q	T	H	G	V	A	T	E	E	F
Template Known Secondary structure							T											T	T		S		.	.	.	.	.	.											T			S								S	G	G	G			.								T	T			S						G	G	G		S
Template Predicted Secondary structure																							.	.	.	.	.	.																												.
Template SS confidence
		179	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.							200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.		.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.
		251	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		I	K	R	I	A	A
Query Conservation
Alig confidence
Template Conservation
Template Sequence		I	K	L	G	G	K
Template Known Secondary structure						G	G
Template Predicted Secondary structure
Template SS confidence
		252	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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