 |
Job Description | P37387 | Confidence | 59.05% | Date | Thu Jan 5 11:55:34 GMT 2012 |
Rank | 139 | Aligned Residues | 82 |
% Identity | 18% | Template | c3qvjB_ |
PDB info |
PDB header:isomerase | Chain: B: PDB Molecule:putative hydantoin racemase; |
PDBTitle: allantoin racemase from klebsiella pneumoniae
|
Resolution | 2.10 Å |
|
 |
  |   |
25 | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | |
|
|
|
|
|
|
|
|
|
|
|
|
. | . | . | . | 70 | . | . | . | . | . | . | . | . | . | 80 | . | . | . | . | . | . | . | . | . | 90 | . |
Predicted Secondary structure |   |
|
|  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |
|
|
| . | . | . | . | . | . | . | . | . | . | . | . | . |
|  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |
|
|
|
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
E | V | K | I | G | M | A | I | D | D | L | R | L | E | R | W | Q | K | D | R | D | I | F | V | K | K | A | E | S | L | G | A | K | V | F | V | Q | S | A | N | G | . |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
N | E | E | T | Q | M | S | Q | I | E | N | M | I | N | R | G | V | D | V | L | V | I | I | P | Y | N |
Query Conservation |   |
  |   |   |
|
|
|
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|   |   |   |   |
|   |   |   |
|   |   |   |   |
|   |   |   |   |   | . | . | . | . | . | . | . | . | . | . | . | . | . |
|   |   |   |
|   |   |   |
|   |   |
|
|   |   |   |   |   |   |
|
|   |   |   |   |   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . | . | . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |
|
|
|   |
|
|
|
|   |
|
|   |   |   |   |   |   |
|   |   |   |   |   |   |   |   |   |
| . |   |   |   |
|   |   |   |   |   |   |   |   |   |   |   |
|   |   |   |   |   |   |   |   |   |   |   |   |
|   |   |   |   |   |   |   |   |   |   |
|   |
|
|
|
|
|
|
|   |
|
Template Sequence |   |
S | V | R | I | Q | V | I | N | P | N | T | S | L | A | X | T | E | T | I | G | A | A | A | R | A | V | A | A | P | . |
G | T | E | I | L | A | V | C | P | R | A | G | V | P | S | I | E | G | H | F | D | E | A | I | A | A | V | G | V | L | E | Q | I | R | A | G | R | E | Q | G | V | D | G | H | V | I | A | C | F | G |
Template Known Secondary structure |   |
|  |  |  |  |  |  |
| S | S |
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
| T | . | T |  |  |  |  |  |  |
|
| S | S | S |
| S | S |
|
| S |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | T | T |
| S |  |  |  |  |
| S | T | T |
Template Predicted Secondary structure |   |
|  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
| . |
|
|  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |
|
|
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
3 | . | . | . | . | . | . | 10 | . | . | . | . | . | . | . | . | . | 20 | . | . | . | . | . | . | . | . | . | 30 | . | |
. | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . | . | . | . | . | . | 80 | . |
  |
  |   |
92 | . | . | . | . | . | . | . | 100 | . | . | . | . | . | . | . | . | . | 110 |
Predicted Secondary structure |   |
|
|
|
|
|  |  |  |  |  |  |  |  |
|
|
|
|  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
G | Q | V | L | S | N | V | V | K | E | A | K | Q | E | G | I | K | V | L |
Query Conservation |   |
  |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
Alig confidence |   |
|
| . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |   | . | . | . |   |
|   |   |
|
|   |   |   |   |
|
|
|
|
Template Sequence |   |
D | P | . |
. |
. |
G | L | L | A | A | R | E | L | A | Q | G | P | V | I |
Template Known Secondary structure |   |
| T | . | . | . | T |  |  |  |  |  |  |  |
| S | S |
|  |  |
Template Predicted Secondary structure |   |
|  | . | . | . |  |  |  |  |  |  |  |  |
|
|
|
|  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
82 | . | |
|
|
. | . | . | . | . | . | 90 | . | . | . | . | . | . | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|