Job Description P37387 Confidence 92.48% Date Thu Jan 5 11:55:34 GMT 2012 Rank 104 Aligned Residues 204 % Identity 7% Template c3p3wC_ PDB info PDB header:transport protein Chain: C: PDB Molecule:glutamate receptor 3; PDBTitle: structure of a dimeric glua3 n-terminal domain (ntd) at 4.2 a2 resolution Resolution 4.20 Å

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		24	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.				.	.	.	60	.	.	.	.		.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																																			.	.	.									.
Query SS confidence																																			.	.	.									.
Query Sequence		K	E	V	K	I	G	M	A	I	D	D	L	R	L	E	R	W	Q	K	D	R	D	I	F	V	K	K	A	E	S	L	G	A	.	.	.	K	V	F	V	Q	S	A	N	.	G	N	E	E	T	Q	M	S	Q	I	E	N	M	I	N	R	G	V	D	V	L	V	I	I	P	Y	N	G	Q	V	L	S	N	V	V
Query Conservation																																			.	.	.									.
Alig confidence																																			.	.	.									.																								.
Template Conservation																																																																						.
Template Sequence		N	T	I	S	I	G	G	L	F	M	R	N	T	V	Q	E	H	S	A	F	R	F	A	V	Q	L	Y	N	T	N	Q	N	P	F	H	L	N	Y	H	V	D	H	L	D	S	S	N	S	F	S	V	T	N	A	F	C	S	Q	F	S	R	G	V	Y	A	I	F	G	.	F	Y	D	Q	M	S	M	N	T	L	T
Template Known Secondary structure												S	S																	S																S	S															T	T		S					.				T	T	T
Template Predicted Secondary structure																																																																						.
Template SS confidence
		4	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.		.	.	.	.	.	.	.	.	80	.	.
		100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		K	E	A	K	Q	E	G	I	K	V	L	A	Y	D	R	M	I	N	D	A	D	I	D	F	Y	I	S	F	D	N	E	K	V	G	E	L	Q	A	K	A	L	V	D	I	V	P	Q	G	N	Y	F	L	M	G	G	S	P	V	D	N	N	A	K	L	F	R	A	G	Q	M	K	V	L	K	P	Y	V	D	S	G
Query Conservation
Alig confidence																																.	.	.																						.	.																						.	.	.
Template Conservation																																.	.	.																						.	.																						.	.	.
Template Sequence		S	F	C	G	A	L	H	T	S	F	V	T	P	S	F	P	T	D	A	D	V	Q	F	V	I	Q	M	R	P	A	.	.	.	L	K	G	A	I	L	S	L	L	S	Y	Y	K	W	E	K	F	V	Y	L	Y	.	.	D	T	E	R	G	F	S	V	L	Q	A	I	M	E	A	A	V	Q	N	N	W	.	.	.
Template Known Secondary structure							T	T						S	S				S	S			S	S					S			.	.	.												T	T									.	.		S	S	S		S											T	T	T	T		.	.	.
Template Predicted Secondary structure																																.	.	.																						.	.																						.	.	.
Template SS confidence
		87	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.				.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.			.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.
		180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240
Predicted Secondary structure
Query SS confidence
Query Sequence		K	I	K	V	V	G	D	Q	W	V	D	G	W	L	P	E	N	A	L	K	I	M	E	N	A	L	T	A	N	N	N	K	I	D	A	V	V	A	S	N	D	A	T	A	G	G	A	I	Q	A	L	S	A	Q	G	L	S	G	K	V	A
Query Conservation
Alig confidence		.	.																								.	.
Template Conservation		.	.																								.	.
Template Sequence		.	.	Q	V	T	A	R	S	V	G	N	I	K	D	V	Q	E	F	R	R	I	I	E	E	M	.	.	D	R	R	Q	E	K	R	Y	L	I	D	C	E	V	E	R	I	N	T	I	L	E	Q	V	K	H	S	R	G	Y	H	Y	M	L
Template Known Secondary structure		.	.								S	S			S	T	T										.	.	T	T	T	T																			T					T	T
Template Predicted Secondary structure		.	.																								.	.
Template SS confidence
				159	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.			.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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