Job Description P37387 Confidence 75.91% Date Thu Jan 5 11:55:34 GMT 2012 Rank 125 Aligned Residues 242 % Identity 15% Template c3opyH_ PDB info PDB header:transferase Chain: H: PDB Molecule:6-phosphofructo-1-kinase beta-subunit; PDBTitle: crystal structure of pichia pastoris phosphofructokinase in the t-2 state Resolution 3.05 Å

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		20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.
Predicted Secondary structure																																												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		A	A	H	A	K	E	V	K	I	G	M	A	I	D	D	L	R	L	E	R	W	Q	K	D	R	D	I	F	V	K	K	A	E	S	L	G	A	K	V	F	V	Q	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Conservation																																												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																																												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		V	N	E	R	V	R	K	T	I	G	V	M	T	S	G	G	D	S	P	G	M	N	P	F	V	R	A	V	V	R	A	G	I	Y	K	G	C	K	V	F	C	I	H	E	G	Y	E	G	L	V	R	G	G	E	K	Y	I	K	E	T	Q	W	H	D	V	R	G	W	L	V	E	G	G	T	N	I	G	T	A	R
Template Known Secondary structure																S	S			T	T															T	T							T	T									S	T	T	T						G	G	G	G	T	T	T	T	T			S		S	S
Template Predicted Secondary structure
Template SS confidence
		152	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.
			62	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100														.	.	.	.	.	.	.	.	.	110	.	.					.	.	.	.	.	.	.	120	.	.	.
Predicted Secondary structure		.																																								.	.	.	.	.	.	.	.	.	.	.	.	.													.	.	.	.
Query SS confidence		.																																								.	.	.	.	.	.	.	.	.	.	.	.	.													.	.	.	.
Query Sequence		.	S	A	N	G	N	E	E	T	Q	M	S	Q	I	E	N	M	I	N	R	G	V	D	V	L	V	I	I	P	Y	N	G	Q	V	L	S	N	V	V	K	.	.	.	.	.	.	.	.	.	.	.	.	.	E	A	K	Q	E	G	I	K	V	L	A	Y	.	.	.	.	D	R	M	I	N	D	A	D	I	D	F
Query Conservation		.																																								.	.	.	.	.	.	.	.	.	.	.	.	.													.	.	.	.
Alig confidence		.																																								.	.	.	.	.	.	.	.	.	.	.	.	.													.	.	.	.
Template Conservation
Template Sequence		C	K	E	F	R	E	R	S	G	R	L	K	A	C	K	N	M	I	D	M	G	I	D	A	L	I	V	C	G	G	D	G	S	L	T	G	A	D	R	F	R	S	E	W	P	S	L	I	E	E	Q	Q	Q	F	N	T	H	Q	N	L	N	I	C	G	A	V	G	S	I	D	N	D	M	S	S	T	D	A	T	I
Template Known Secondary structure			S	G	G	G	S														T	T																						T														T		S										S	S				S	S		S	S
Template Predicted Secondary structure
Template SS confidence
		256	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.
		124	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		Y	I	S	F	D	N	E	K	V	G	E	L	Q	A	K	A	L	V	D	I	V	P	Q	G	N	Y	F	L	M	G	G	S	P	V	D	N	N	A	K	L	F	R	A	G	Q	M	K	V	L	K	P	Y	V	D	S	G	K	I	K	V	V	G	D	Q	W	V	D	G	W	L	P	E	N	A	L	K	I	M	E	N
Query Conservation
Alig confidence																						.															.	.	.	.	.	.	.
Template Conservation																						.															.	.	.	.	.	.	.
Template Sequence		G	A	F	S	S	L	D	R	I	C	R	A	I	D	Y	I	D	A	T	A	.	S	H	S	R	A	F	I	V	E	V	M	G	R	H	.	.	.	.	.	.	.	C	G	W	L	G	L	L	A	G	L	A	T	S	A	D	Y	I	L	I	P	E	K	P	A	S	S	R	E	W	Q	D	Q	M	C	D	I	V	G
Template Known Secondary structure																			S			.			S										S	S	.	.	.	.	.	.	.												T	T		S					T	T	S				S	S
Template Predicted Secondary structure																						.															.	.	.	.	.	.	.
Template SS confidence
		344	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.		.	.	.	.	.	.	370	.	.	.	.	.	.	.								.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.
		204	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.									.	.	.	.	.	.	.	.	230	.	.	.		.	.	.	.	.	.	240	.	.	.	.				.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.
Predicted Secondary structure																				.	.	.	.	.	.	.	.													.												.	.	.
Query SS confidence																				.	.	.	.	.	.	.	.													.												.	.	.
Query Sequence		A	L	T	A	N	N	N	K	I	D	A	V	V	A	S	N	D	A	.	.	.	.	.	.	.	.	T	A	G	G	A	I	Q	A	L	S	A	Q	.	G	L	S	G	K	V	A	I	S	G	Q	.	.	.	D	A	D	L	A	G	I	K	R	I	A	A	G	T	Q	T	M	T	V	Y	K	P	I	T	L	L	A
Query Conservation																				.	.	.	.	.	.	.	.													.												.	.	.
Alig confidence																				.	.	.	.	.	.	.	.													.												.	.	.													.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																																																			.	.	.	.	.	.	.	.	.	.	.
Template Sequence		K	H	R	A	R	G	K	R	K	T	I	V	I	V	A	E	G	A	I	S	N	D	L	S	P	I	S	C	D	Q	V	K	D	V	L	V	N	R	L	G	L	D	T	R	V	T	T	L	G	H	V	Q	R	G	G	T	A	V	A	F	D	R	I	Y	A	.	.	.	.	.	.	.	.	.	.	.	T	L	Q	G
Template Known Secondary structure							T										T	T		B		T	T			B													T	S										G	G	G	G	T		S											.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																																																																			.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		417	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.												.	.	.	.
		272	.	.	.	.	.	.	.	280
Predicted Secondary structure
Query SS confidence
Query Sequence		N	T	A	A	E	I	A	V	E
Query Conservation
Alig confidence
Template Conservation
Template Sequence		V	E	A	V	N	A	V	L	E
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		486	.	.	.	490	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions