Job Description P37387 Confidence 65.87% Date Thu Jan 5 11:55:34 GMT 2012 Rank 131 Aligned Residues 238 % Identity 16% Template c3o8oB_ PDB info PDB header:transferase Chain: B: PDB Molecule:6-phosphofructokinase subunit beta; PDBTitle: structure of phosphofructokinase from saccharomyces cerevisiae Resolution 2.90 Å

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		25	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.																																								.	.	.	.
Predicted Secondary structure																																							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		E	V	K	I	G	M	A	I	D	D	L	R	L	E	R	W	Q	K	D	R	D	I	F	V	K	K	A	E	S	L	G	A	K	V	F	V	Q	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	S	A	N	G
Query Conservation																																							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																																							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		Q	K	A	I	A	V	M	T	S	G	G	D	A	P	G	M	N	S	N	V	R	A	I	V	R	S	A	I	F	K	G	C	R	A	F	V	V	M	E	G	Y	E	G	L	V	R	G	G	P	E	Y	I	K	E	F	H	W	E	D	V	R	G	W	S	A	E	G	G	T	N	I	G	T	A	R	C	M	E	F	K
Template Known Secondary structure											S	S			T	T																T							T	T							S		S	T	T	T						G	G	G	G	T	T	G	G	G			S		T	T						S	G	G	G
Template Predicted Secondary structure
Template SS confidence
		196	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.
		66	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.																						.	.	.	.	.	110					.	.	.	.	.	.	.	.	.	120
Predicted Secondary structure																																									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.							.	.	.	.
Query SS confidence																																									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.							.	.	.	.
Query Sequence		N	E	E	T	Q	M	S	Q	I	E	N	M	I	N	R	G	V	D	V	L	V	I	I	P	Y	N	G	Q	V	L	S	N	V	V	K	E	A	K	Q	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	E	G	I	K	V	L	.	.	.	.	A	Y	D	R	M	I	N	D	A	D
Query Conservation																																									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.							.	.	.	.
Alig confidence																																									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.							.	.	.	.
Template Conservation
Template Sequence		K	R	E	G	R	L	L	G	A	Q	H	L	I	E	A	G	V	D	A	L	I	V	C	G	G	D	G	S	L	T	G	A	D	L	F	R	S	E	W	P	S	L	I	E	E	L	L	K	T	N	R	I	S	N	E	Q	Y	E	R	M	K	H	L	N	I	C	G	T	V	G	S	I	D	N	D	M	S	T	T	D
Template Known Secondary structure		S															T																																T	T	S	S	S								T										B		T	T				T	T		S
Template Predicted Secondary structure
Template SS confidence
		276	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.
		121	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200
Predicted Secondary structure
Query SS confidence
Query Sequence		I	D	F	Y	I	S	F	D	N	E	K	V	G	E	L	Q	A	K	A	L	V	D	I	V	P	Q	G	N	Y	F	L	M	G	G	S	P	V	D	N	N	A	K	L	F	R	A	G	Q	M	K	V	L	K	P	Y	V	D	S	G	K	I	K	V	V	G	D	Q	W	V	D	G	W	L	P	E	N	A	L	K	I
Query Conservation
Alig confidence																																																				.	.	.	.	.	.	.
Template Conservation																																																				.	.	.	.	.	.	.
Template Sequence		A	T	I	G	A	Y	S	A	L	D	R	I	C	K	A	I	D	Y	V	E	A	T	A	N	S	H	S	R	A	F	V	V	E	V	M	G	R	N	C	G	W	L	A	L	L	A	G	I	A	T	.	.	.	.	.	.	.	S	A	D	Y	I	F	I	P	E	K	P	A	T	S	S	E	W	Q	D	Q	M	C	D
Template Known Secondary structure				B	T																						T	T										T	T													.	.	.	.	.	.	.	T		S					T	T					T	T
Template Predicted Secondary structure																																																				.	.	.	.	.	.	.
Template SS confidence
		356	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.								.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.
		201	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.									.	.	.	.	.	.	.	.	230	.	.	.		.	.	.	.	.	.	240	.	.	.	.				.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.
Predicted Secondary structure																							.	.	.	.	.	.	.	.													.												.	.	.
Query SS confidence																							.	.	.	.	.	.	.	.													.												.	.	.
Query Sequence		M	E	N	A	L	T	A	N	N	N	K	I	D	A	V	V	A	S	N	D	A	.	.	.	.	.	.	.	.	T	A	G	G	A	I	Q	A	L	S	A	Q	.	G	L	S	G	K	V	A	I	S	G	Q	.	.	.	D	A	D	L	A	G	I	K	R	I	A	A	G	T	Q	T	M	T	V	Y	K	P	I	T
Query Conservation																							.	.	.	.	.	.	.	.													.												.	.	.
Alig confidence																							.	.	.	.	.	.	.	.													.												.	.	.													.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																																																						.	.	.	.	.	.	.	.	.	.	.
Template Sequence		I	V	S	K	H	R	S	R	G	K	R	T	T	I	V	V	V	A	E	G	A	I	A	A	D	L	T	P	I	S	P	S	D	V	H	K	V	L	V	D	R	L	G	L	D	T	R	I	T	T	L	G	H	V	Q	R	G	G	T	A	V	A	Y	D	R	I	L	A	.	.	.	.	.	.	.	.	.	.	.	T
Template Known Secondary structure									T	T										T	T		B		T	T	S		B													T	T										G	G	G	G	T		S											.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																																																																						.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		429	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.												.
		269	270	.	.	.	.	.	.	.	.	.	280
Predicted Secondary structure
Query SS confidence
Query Sequence		L	L	A	N	T	A	A	E	I	A	V	E
Query Conservation
Alig confidence
Template Conservation
Template Sequence		L	Q	G	L	E	A	V	N	A	V	L	E
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		498	.	500	.	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions