Job Description P37387 Confidence 100.00% Date Thu Jan 5 11:55:34 GMT 2012 Rank 32 Aligned Residues 267 % Identity 15% Template c3o74A_ PDB info PDB header:transcription Chain: A: PDB Molecule:fructose transport system repressor frur; PDBTitle: crystal structure of cra transcriptional dual regulator from2 pseudomonas putida Resolution 2.00 Å

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		25	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		E	V	K	I	G	M	A	I	D	D	L	R	L	E	R	W	Q	K	D	R	D	I	F	V	K	K	A	E	S	L	G	A	K	V	F	V	Q	S	A	N	G	N	E	E	T	Q	M	S	Q	I	E	N	M	I	N	R	G	V	D	V	L	V	I	I	P	Y	N	G	Q	V	L	S	N	V	V	K	E	A	K	Q
Query Conservation
Alig confidence																																																																								.
Template Conservation																																																																								.
Template Sequence		T	R	T	L	G	F	I	L	P	D	L	E	N	P	S	Y	A	R	I	A	K	Q	L	E	Q	G	A	R	A	R	G	Y	Q	L	L	I	A	S	S	D	D	Q	P	D	S	E	R	Q	L	Q	Q	L	F	R	A	R	R	C	D	A	L	F	V	A	S	C	L	P	P	E	.	D	D	S	Y	R	E	L	Q	D
Template Known Secondary structure										S		T	T																		T	T									T	T															T	T		S										S	S	.
Template Predicted Secondary structure																																																																								.
Template SS confidence
		61	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130		.	.	.	.	.	.	.	.	.
		105	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		E	G	I	K	V	L	A	Y	D	R	M	I	N	D	A	D	I	D	F	Y	I	S	F	D	N	E	K	V	G	E	L	Q	A	K	A	L	V	D	I	V	P	Q	G	N	Y	F	L	M	G	G	S	P	V	D	N	N	A	K	L	F	R	A	G	Q	M	K	V	L	K	P	Y	V	D	S	G	K	I	K	V	V
Query Conservation
Alig confidence																	.	.																																																										.	.	.	.	.
Template Conservation																	.	.																																																										.	.	.	.	.
Template Sequence		K	G	L	P	V	I	A	I	D	R	R	L	D	P	A	.	.	H	F	C	S	V	I	S	D	D	R	D	A	S	R	Q	L	A	A	S	L	L	S	S	A	P	R	S	I	A	L	I	G	A	R	P	E	L	S	V	S	Q	A	R	A	G	G	F	D	E	A	L	Q	G	Y	T	G	E	.	.	.	.	.	V
Template Known Secondary structure		T	T							S	S				T	T	.	.	T																					T	T			S									T	T	S														T	T	T			S		.	.	.	.	.
Template Predicted Secondary structure																	.	.																																																										.	.	.	.	.
Template SS confidence
		140	.	.	.	.	.	.	.	.	.	150	.	.	.	.			.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.						.
		185	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.		.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.
Predicted Secondary structure																																																					.
Query SS confidence																																																					.
Query Sequence		G	D	Q	W	V	D	G	W	L	P	E	N	A	L	K	I	M	E	N	A	L	T	A	N	N	N	K	I	D	A	V	V	A	S	N	D	A	T	A	G	G	A	I	Q	A	L	S	A	Q	G	L	.	S	G	K	V	A	I	S	G	Q	D	A	D	L	A	G	I	K	R	I	A	A	G	T	Q	T	M	T	V
Query Conservation																																																					.
Alig confidence																																																					.														.	.									.
Template Conservation																																																																			.	.									.
Template Sequence		R	R	Y	Q	G	E	A	F	S	R	E	C	G	Q	R	L	X	Q	Q	L	I	D	D	L	G	G	L	P	D	A	L	V	T	T	S	Y	V	L	L	Q	G	V	F	D	T	L	Q	A	R	P	V	D	S	R	Q	L	Q	L	G	T	F	G	D	N	Q	.	.	L	L	D	F	L	P	L	P	.	V	N	A	X
Template Known Secondary structure							S	S	S	S																T	S			S					S	S													T	S		G	G	G									S			G	.	.	G	G	G	T	S	S	S		.
Template Predicted Secondary structure																																																																			.	.									.
Template SS confidence
		213	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.			.	.	280	.	.	.	.	.		.	.	.	.
		264	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		Y	K	P	I	T	L	L	A	N	T	A	A	E	I	A	V	E	L	G	N	G	Q	E	P	K	A	D	T	T	L	N	N	G	L	K	D	V	P	S	R	L	L	T	P	I	D	V	N	K	N
Query Conservation
Alig confidence																													.	.	.	.	.	.	.	.	.	.	.
Template Conservation																													.	.	.	.	.	.	.	.	.	.	.
Template Sequence		A	Q	Q	H	G	Q	I	A	A	T	A	L	E	L	A	L	A	A	I	E	E	K	R	Y	E	P	G	.	.	.	.	.	.	.	.	.	.	.	V	H	A	V	G	R	T	F	K	Q	R	I
Template Known Secondary structure																													.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																													.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.												.	.	.	320	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions