Job Description P37387 Confidence 100.00% Date Thu Jan 5 11:55:34 GMT 2012 Rank 37 Aligned Residues 261 % Identity 13% Template c3egcF_ PDB info PDB header:structural genomics, unknown function Chain: F: PDB Molecule:putative ribose operon repressor; PDBTitle: crystal structure of a putative ribose operon repressor from2 burkholderia thailandensis Resolution 2.35 Å

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		24	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		K	E	V	K	I	G	M	A	I	D	D	L	R	L	E	R	W	Q	K	D	R	D	I	F	V	K	K	A	E	S	L	G	A	K	V	F	V	Q	S	A	N	G	N	E	E	T	Q	M	S	Q	I	E	N	M	I	N	R	G	V	D	V	L	V	I	I	P	Y	N	G	Q	V	L	S	N	V	V	K	E	A	K
Query Conservation
Alig confidence																																																																							.	.	.
Template Conservation																																																																							.	.	.
Template Sequence		R	S	N	V	V	G	L	I	V	S	D	I	E	N	V	F	F	A	E	V	A	S	G	V	E	S	E	A	R	H	K	G	Y	S	V	L	L	A	N	T	A	E	D	I	V	R	E	R	E	A	V	G	Q	F	F	E	R	R	V	D	G	L	I	L	A	P	S	E	G	.	.	.	E	H	D	Y	L	R	T	E
Template Known Secondary structure											S		T	T	S																	T	T									T	T															T	T		S								S	S	.	.	.								S
Template Predicted Secondary structure																																																																							.	.	.
Template SS confidence
		66	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.				.	.	.	.	.	140	.	.
		104	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		Q	E	G	I	K	V	L	A	Y	D	R	M	I	N	D	A	D	I	D	F	Y	I	S	F	D	N	E	K	V	G	E	L	Q	A	K	A	L	V	D	I	V	P	Q	G	N	Y	F	L	M	G	G	S	P	V	D	N	N	A	K	L	F	R	A	G	Q	M	K	V	L	K	P	Y	V	D	S	G	K	I	K	V
Query Conservation
Alig confidence																																												.
Template Conservation																																												.
Template Sequence		L	P	K	T	F	P	I	V	A	V	N	R	E	L	R	I	P	G	C	G	A	V	L	S	E	N	V	R	G	A	R	T	A	V	E	Y	L	I	A	R	G	H	.	T	R	I	G	A	I	V	G	S	A	G	L	M	T	S	R	E	R	L	K	G	F	R	A	A	M	S	A	A	G	L	P	V	R	Q	E	W
Template Known Secondary structure		S		T	T	S						S	S					T	T																						T	T		.		S						S	S	T	T	S																	T	T					G	G	G
Template Predicted Secondary structure																																												.
Template SS confidence
		143	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.		.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.
		184	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		V	G	D	Q	W	V	D	G	W	L	P	E	N	A	L	K	I	M	E	N	A	L	T	A	N	N	N	K	I	D	A	V	V	A	S	N	D	A	T	A	G	G	A	I	Q	A	L	S	A	Q	G	L	S	G	K	V	A	I	S	G	Q	D	A	D	L	A	G	I	K	R	I	A	A	G	T	Q	T	M	T	V
Query Conservation
Alig confidence							.	.	.	.	.	.	.	.	.	.																																																													.
Template Conservation							.	.	.	.	.	.	.	.	.	.																																																													.
Template Sequence		I	A	A	N	G	.	.	.	.	.	.	.	.	.	.	R	D	G	A	I	K	V	L	T	G	A	D	R	P	T	A	L	L	T	S	S	H	R	I	T	E	G	A	M	Q	A	L	N	V	L	G	L	R	Y	G	P	D	V	E	I	V	S	F	D	N	L	P	W	M	A	F	L	D	P	P	.	L	P	V	V
Template Known Secondary structure							.	.	.	.	.	.	.	.	.	.									T	S	T	T			S					S	S														T	T			B	T	T	T	B						S			G	G	G	G	G	S	S	S		.
Template Predicted Secondary structure							.	.	.	.	.	.	.	.	.	.																																																													.
Template SS confidence
		222	.	.	.	.											.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.		.	.	.	290
		264	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.
Predicted Secondary structure
Query SS confidence
Query Sequence		Y	K	P	I	T	L	L	A	N	T	A	A	E	I	A	V	E	L	G	N	G	Q	E	P	K	A	D	T	T	L	N	N	G	L	K	D	V	P	S	R	L	L	T	P	I	D	V	N
Query Conservation
Alig confidence																												.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																												.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		E	Q	P	T	R	R	I	G	Q	E	A	M	R	M	L	I	H	M	I	E	G	T	G	N	A	T	.	.	.	.	.	.	.	.	.	.	.	.	E	M	R	L	Q	T	R	F	V	T
Template Known Secondary structure																						T	S	S				.	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																												.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		297	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.													.	.	.	.	.	.	.	330	.	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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