Job Description P37387 Confidence 99.96% Date Thu Jan 5 11:55:34 GMT 2012 Rank 59 Aligned Residues 254 % Identity 16% Template c3bilA_ PDB info PDB header:structural genomics, unknown function Chain: A: PDB Molecule:probable laci-family transcriptional regulator; PDBTitle: crystal structure of a probable laci family transcriptional2 regulator from corynebacterium glutamicum Resolution 2.50 Å

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		27	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		K	I	G	M	A	I	D	D	L	R	L	E	R	W	Q	K	D	R	D	I	F	V	K	K	A	E	S	L	G	A	K	V	F	V	Q	S	A	N	G	N	E	E	T	Q	M	S	Q	I	E	N	M	I	N	R	G	V	D	V	L	V	I	I	P	Y	N	G	Q	V	L	S	N	V	V	K	E	A	K	Q	E	G
Query Conservation
Alig confidence																																																																					.	.	.
Template Conservation																																																																					.	.	.
Template Sequence		T	I	G	V	I	V	P	S	L	I	N	H	Y	F	A	A	M	V	T	E	I	Q	S	T	A	S	K	A	G	L	A	T	I	I	T	N	S	N	E	D	A	T	T	M	S	G	S	L	E	F	L	T	S	H	G	V	D	G	I	I	C	V	P	N	E	E	C	.	.	.	A	N	Q	L	E	D	L	Q	K	Q
Template Known Secondary structure								S		S	S	S																	T	T									T	T															T	T		S								G	G	G	.	.	.
Template Predicted Secondary structure																																																																					.	.	.
Template SS confidence
		67	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.				.	.	.	.	.	.	140	.	.	.
		107	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		I	K	V	L	A	Y	D	R	M	I	N	D	A	D	I	D	F	Y	I	S	F	D	N	E	K	V	G	E	L	Q	A	K	A	L	V	D	I	V	P	Q	G	N	Y	F	L	M	G	G	S	P	V	D	N	N	A	K	L	F	R	A	G	Q	M	K	V	L	K	P	Y	V	D	S	G	K	I	K	V	V	G	D
Query Conservation
Alig confidence																																						.	.
Template Conservation																																						.	.
Template Sequence		M	P	V	V	L	V	D	R	E	L	P	G	D	T	I	P	T	A	T	S	N	P	Q	P	G	I	A	A	A	V	E	L	L	A	H	N	.	.	N	A	L	P	I	G	Y	L	S	G	P	M	D	T	S	T	G	R	E	R	L	E	D	F	K	A	A	C	A	N	S	K	I	G	E	Q	L	V	F	L	G	G
Template Known Secondary structure								S	S			S																									T	.	.	T			S								T	T	S																	T	T
Template Predicted Secondary structure																																						.	.
Template SS confidence
		145	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180			.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.
		187	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.			.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.
Predicted Secondary structure																																																			.	.
Query SS confidence																																																			.	.
Query Sequence		Q	W	V	D	G	W	L	P	E	N	A	L	K	I	M	E	N	A	L	T	A	N	N	N	K	I	D	A	V	V	A	S	N	D	A	T	A	G	G	A	I	Q	A	L	S	A	Q	G	L	.	.	S	G	K	V	A	I	S	G	Q	D	A	D	L	A	G	I	K	R	I	A	A	G	T	Q	T	M	T	V	Y
Query Conservation																																																			.	.
Alig confidence					.	.	.	.	.	.	.	.																																							.	.														.	.									.
Template Conservation					.	.	.	.	.	.	.	.																																																						.	.									.
Template Sequence		Y	E	Q	.	.	.	.	.	.	.	.	S	V	G	F	E	G	A	T	K	L	L	D	Q	G	A	K	T	L	F	A	G	D	S	M	M	T	I	G	V	I	E	A	C	H	K	A	G	L	V	I	G	K	D	V	S	V	I	G	F	D	T	H	P	.	.	L	F	A	L	Q	P	H	P	.	L	T	V	I	D
Template Known Secondary structure		S	S		.	.	.	.	.	.	.	.													T	T		S					S	S														T	T			B	T	T	T	B						S			G	.	.	G	G	G	G	S	S	S		.
Template Predicted Secondary structure					.	.	.	.	.	.	.	.																																																						.	.									.
Template SS confidence
		224	.	.									.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.			280	.	.	.	.	.	.	.		.	.	290	.	.
		265	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		K	P	I	T	L	L	A	N	T	A	A	E	I	A	V	E	L	G	N	G	Q	E	P	K	A	D	T	T	L	N	N	G	L	K	D	V	P	S	R	L	L	T	P	I	D	V	N	K	N	N	I	K	D
Query Conservation
Alig confidence																					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		Q	N	V	E	Q	L	A	Q	R	A	V	S	I	L	T	E	L	T	T	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	I	P	T	A	L	I	H	R	E	S	I	I	N
Template Known Secondary structure																					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.									S
Template Predicted Secondary structure																					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		293	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.																						.	.	.	.	.	.	.	.	320	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions