|   |
969 | 970 | . | . | . | . | . | . | . | . | . | 980 | . | . | |
|
|
|
|
|
|
. | . | . | . | . | . | . | 990 | . | . | . | . | . | . | . | . | . | 1000 | . | . | . | . | . | . | . | . | . | 1010 | . | . | . | . | . | . | . | . | |
|
|
. | 1020 | . | . | . | . | . | . | . | . | . | 1030 | . | . | . | . | . | . | . | . |
Predicted Secondary structure |   |
|
|  |  |  |  |  |  |  |  |  |  |  |
| . | . | . | . | . | . | . |
|
|
|  |  |  |  |  |  |
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
| . | . | . |  |  |  |  |  |  |
|
|  |  |  |  |  |  |  |  |  |
|
|
|
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
. |
. |
. |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
L | T | S | G | Q | R | A | A | T | R | M | I | L | E | . |
. |
. |
. |
. |
. |
. |
T | S | D | R | F | T | V | V | Q | G | Y | A | G | V | G | K | T | T | Q | F | R | A | V | M | S | A | V | N | M | L | P | E | S | E | R | P | . |
. |
. |
R | V | V | G | L | G | P | T | H | R | A | V | G | E | M | R | S | A | G | V |
Query Conservation |   |
|
|   |   |
|   |   |
|
|   |   |
|
|
| . | . | . | . | . | . | . |
|   |
|
|   |   |   |
|   |
|   |
|
|
|
|
|
|
|   |
|   |
|
|   |   |   |
|   |   |   |   |   |   |   |
|   | . | . | . |   |
|   |   |
|
|
|
|   |
|
|
|   |   |
|   |   |   |
|
|
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . |
Template Conservation |   |
|   |   |   |
|   |   |   |
|   |   |
|   |   |   |   |   |   |   |   |   |   |   |   |   |
|   |
|
|
|
|   |
|
|
|
|
|
|   |   |   |
|   |   |
|   |   |
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|
|
|   |
|   |
|
|   |   |
|
|   |   |
| . | . | . |
Template Sequence |   |
L | R | P | H | Q | R | E | G | V | K | F | L | W | D | C | V | T | G | R | R | I | E | N | S | Y | G | C | I | M | A | D | E | M | G | L | G | K | T | L | Q | C | I | T | L | I | W | T | L | L | K | Q | S | P | D | C | K | P | E | I | D | K | V | I | V | V | S | P | S | S | L | V | R | N | W | Y | N | E | . |
. |
. |
Template Known Secondary structure |   |
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  | T | T | S | S | S | T | T |
|
|  |  |  |  |
|
|
| T | T | S |
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
| T | T | S | S |
| S |
| S |
|  |  |  |  |  |
|  |  |  |  |  |  |  |  |  |  | . | . | . |
Template Predicted Secondary structure |   |
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|  |  |  |  |
|
|  |  |  |  |  |  |  |  |  |  | . | . | . |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
147 | . | . | 150 | . | . | . | . | . | . | . | . | . | 160 | . | . | . | . | . | . | . | . | . | 170 | . | . | . | . | . | . | . | . | . | 180 | . | . | . | . | . | . | . | . | . | 190 | . | . | . | . | . | . | . | . | . | 200 | . | . | . | . | . | . | . | . | . | 210 | . | . | . | . | . | . | . | . | . | 220 | . | . | . | |
|
|
  |
  |   |
1039 | 1040 | . | . | . | . | . | . | . | . | . | 1050 | . | . | . | . | . | |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
. | . | . | . | 1060 | . | . | . | . | . | . | . | . | . | 1070 | . | . | . | . | . | |
|
. | . |
Predicted Secondary structure |   |
|
|  |  |  |  |  |  |  |  |
|
|
|
|
|
|
| . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |
|
|
|
|
| . | . |
|  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
|
|
Query Sequence |   |
D | A | Q | T | L | A | S | F | L | H | D | T | Q | L | Q | Q | R | . |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
S | G | E | T | P | D | F | S | N | T | L | F | L | L | D | E | S | S | M | V | . |
. |
G | N |
Query Conservation |   |
  |
|   |
|
|
|
|   |
|   |   |   |   |   |   |   |   | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . |   |   |   |   |   |   |   |   |   |   |
|
|
|
|
|
|
|
|
|
| . | . |   |   |
Alig confidence |   |
. | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . |
|
|
Template Conservation |   |
. | . | . | . |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|   |
|   |
|
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|
|   |
|
|
|
|   |
|
|
|   |   |
Template Sequence |   |
. |
. |
. |
. |
V | G | K | W | L | G | G | R | V | Q | P | V | A | I | D | G | G | S | K | D | E | I | D | S | K | L | V | N | F | I | S | Q | Q | G | M | R | I | P | T | P | I | L | I | I | S | Y | E | T | F | R | L | H | A | E | V | L | H | K | G | K | V | G | L | V | I | C | D | E | G | H | R | L | K | N | S | D |
Template Known Secondary structure |   |
. | . | . | . |  |  |  |  |  | G | G | G |
|
|  |  |  |  |
| S | S |
|  |  |  |  |  |  |  |  |  |  |  |  |
|
|
| S | S |
|
| S |
|
|  |  |  |  |  |  |  |  |  |  |  |  | T | T | T | T | T | T | S |
|
|
|  |  |  |  | T | T | G | G | G |
|
| T | T |
|
Template Predicted Secondary structure |   |
. | . | . | . |  |  |  |  |
|
|
|
|
|  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|  |  |  |  |
|  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|  |  |  |  |
|
|
|
|
|
|
|
|  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
|
|
|
|
224 | . | . | . | . | . | 230 | . | . | . | . | . | . | . | . | . | 240 | . | . | . | . | . | . | . | . | . | 250 | . | . | . | . | . | . | . | . | . | 260 | . | . | . | . | . | . | . | . | . | 270 | . | . | . | . | . | . | . | . | . | 280 | . | . | . | . | . | . | . | . | . | 290 | . | . | . | . | . | . | . | . | . |
  |
  |   |
1078 | . | 1080 | . | . | . | . | . | . | . | . | . | 1090 | . | . | . | . | . | . | . | . | . | 1100 | . | . | . | . | . | . | . | . | . | 1110 | . | . | . | . | . | . |
Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |
|
|  |  |  |
|
|
|
|
|
|
|
|  |  |  |  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
T | D | M | A | R | A | Y | A | L | I | A | A | G | G | G | R | A | V | A | S | G | D | T | D | Q | L | Q | A | I | A | P | G | Q | P | F | R | L | Q | Q |
Query Conservation |   |
  |   |   |   |   |
|
|   |   |
|   |   |   |
|
|
|
|
|
|
|
|
|   |   |
|
|   |
|
|
|
|
|   |   |
|   |   |
|   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
|   |   |   |   |
|
|   |   |
| . |   |   |   |   |
|
|
|
|
|
|
|
|   |   |
|   |   |   |
|
|   |   |
|
|   |   |
|   |
Template Sequence |   |
N | Q | T | Y | L | A | L | N | S | M | . |
N | A | Q | R | R | V | L | I | S | G | T | P | I | Q | N | D | L | L | E | Y | F | S | L | V | H | F | V | N |
Template Known Secondary structure |   |
 |  |  |  |  |  |  |  |  |  | . |
|
| S |  |  |  |  |  |
| S | S |
| S | G | G | G | G | G | G |
|  |  |  |  |  |  |  |  |
Template Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |  |
| . |
|
|
|
|  |  |  |  |  |
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
300 | . | . | . | . | . | . | . | . | . | |
310 | . | . | . | . | . | . | . | . | . | 320 | . | . | . | . | . | . | . | . | . | 330 | . | . | . | . | . | . | . |
  |