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Job DescriptionP14565
Confidence99.26%DateWed Jan 25 15:20:38 GMT 2012
Rank21Aligned Residues158
% Identity32%Templated1w36b1
SCOP infoP-loop containing nucleoside triphosphate hydrolases P-loop containing nucleoside triphosphate hydrolases Tandem AAA-ATPase domain
Resolution3.1

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   985....990.........1000.........1010......... 1020.........1030......
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Query Sequence  DRFTVVQGYAGVGKTTQFRAVMSAVNMLPESERPR. . . . . . . . VVGLGPTHRAVGEMRSA. . . . . . . . . . . . . . . . . . . .
Query Conservation 

   
 
 






 
 

   
       
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Template Sequence  QGERLIEASAGTGKTFTIAALYLRLLLGLGGSAAFPRPLTVEELLVVTFTEAATAELRGRIRSNIHELRIACLRETTDNP
Template Known Secondary structure  SS


TTS
TT
SSSSS
SS


GGGS
SS


S
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   16...20.........30.........40.........50.........60.........70.........80.........90.....
 
   1037..1040.........1050........
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Query Sequence  . . . . . . . . . . . . . . . . . . . . . . . . . . . GVDAQTLASFLHDTQLQQRSGE. . . . . . . . . . . . . . . . . . . . . . . . . . . . . . .
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Template Conservation                                
 
        
                                      
Template Sequence  LYERLLEEIDDKAQAAQWLLLAERQMDEAAVFTIHGFCQRMLNLNAFESGMLFEQQLIEDESLLRYQACADFWRRHCYPL
Template Known Secondary structure 
S
GGG
STT

SS




TT
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   96...100.........110.........120.........130.........140.........150.........160.........170.....
 
  
Predicted Secondary structure  ................................................................................
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Query Sequence  . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . .
Query Conservation  ................................................................................
Template Conservation                                                                                  
Template Sequence  PREIAQVVFETWKGPQALLRDINRYLQGEAPVIKAPPPDDETLASRHAQIVARIDTVKQQWRDAVGELDALIESSGIDRR
Template Known Secondary structure 

SSTTTTSSS



SS


TT

TTS

SS






SSS
ST
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   176...180.........190.........200.........210.........220.........230.........240.........250.....
 
  
Predicted Secondary structure  ................................................................................
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Query Sequence  . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . .
Query Conservation  ................................................................................
Template Conservation                                              
                                 
 
Template Sequence  KFNRSNQAKWIDKISAWAEEETNSYQLPESLEKPRHPLFEAIDQLLAEPLSIRDLVITRALAEIRETVAREKRRRGELGF
Template Known Secondary structure  T

SS


S





TTSS




S
TTTS


ST
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   256...260.........270.........280.........290.........300.........310.........320.........330.....
 
   10591060.........1070.........1080.........1090. ........1100... ......1110
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Query Sequence  . . . . . . . . . . . . . . . . . . . . . TPDFSNTLFLLDESSMVGNTDMARAYALIAAGG. GRAVASGDTDQL. . . . . . QAIAPGQ
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Template Sequence  DDMLSRLDSALRSESGEVLAAAIRTRFPVAMIDEFQDTDPQQYRIFRRIWHHQPETALLLIGDPKQAIYAFRGADI. . . F
Template Known Secondary structure  STT
S
SGGG

TT
TT

GGG


GGGT

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   352.......360.........370.........380.........390.........400.........410.........420....... .
 
   1111........1120.........1130.........1140......
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Query Sequence  PFRLQQTRSAADVAIMKEIVRQTPELREAVYSLINR
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Template Conservation           .     
   


   
    
  
  
Template Sequence  TYMKARSEV. HAHYTLDTNWRSAPGMVNSVNKLFSQ
Template Known Secondary structure 
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TTS
S
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   429430....... ..440.........450.........460...
 
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No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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