Job Description P14565 Confidence 100.00% Date Wed Jan 25 15:20:38 GMT 2012 Rank 2 Aligned Residues 266 % Identity 38% Template d1omha_ SCOP info Origin of replication-binding domain, RBD-like Origin of replication-binding domain, RBD-like Relaxase domain Resolution 1.95

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		3	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.		.	.	.	70	.	.	.	.	.	.	.	.	.	80	.
Predicted Secondary structure																																																																		.
Query SS confidence																																																																		.
Query Sequence		S	I	A	Q	V	R	S	A	G	S	A	G	N	Y	Y	T	D	K	D	N	Y	Y	V	L	G	S	M	G	E	R	W	A	G	R	G	A	E	Q	L	G	L	Q	G	S	V	D	K	D	V	F	T	R	L	L	E	G	R	L	P	D	G	A	D	L	.	S	R	M	Q	D	G	S	N	R	H	R	P	G	Y	D
Query Conservation																																																																		.
Alig confidence																			.	.	.	.	.	.	.	.	.	.																																						.
Template Conservation																			.	.	.	.	.	.	.	.	.	.
Template Sequence		X	V	L	T	R	Q	D	I	G	R	A	A	S	Y	Y	G	D	.	.	.	.	.	.	.	.	.	.	A	S	E	W	Q	G	K	G	A	E	E	L	G	L	S	G	E	V	D	S	K	R	F	R	E	L	L	A	G	N	I	G	E	G	H	R	I	X	R	S	A	T	R	Q	D	S	K	E	R	I	G	L	D
Template Known Secondary structure						G	G	G							T				.	.	.	.	.	.	.	.	.	.	S					S						T	T			S	B												T				S	S				S		T	T	S		T	T	S
Template Predicted Secondary structure																			.	.	.	.	.	.	.	.	.	.
Template SS confidence
		5	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.											.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.
		82	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	T	F	S	A	P	K	S	V	S	M	M	A	M	L	G	G	D	K	R	L	I	D	A	H	N	Q	A	V	D	F	A	V	R	Q	V	E	A	L	A	S	T	R	V	M	T	D	G	Q	S	E	T	V	L	T	G	N	L	V	M	A	L	F	N	H	D	T	S	R	D	Q	E	P	Q	L	H	T	H	A	V
Query Conservation
Alig confidence
Template Conservation
Template Sequence		L	T	F	S	A	P	K	S	V	S	L	Q	A	L	V	A	G	D	A	E	I	I	K	A	H	D	R	A	V	A	R	T	L	E	Q	A	E	A	R	A	Q	A	R	Q	K	I	Q	G	K	T	R	I	E	T	T	G	N	L	V	I	G	K	F	R	H	E	T	S	R	E	R	D	P	Q	L	H	T	H	A	V
Template Known Secondary structure																T	S																						T	T								T	T																					T	T
Template Predicted Secondary structure
Template SS confidence
		86	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.
		162	.	.	.	.	.		.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.				.	.	.	.
Predicted Secondary structure								.																																																																			.	.	.
Query SS confidence								.																																																																			.	.	.
Query Sequence		V	A	N	V	T	Q	.	H	N	G	E	W	K	T	L	S	S	D	K	V	G	K	T	G	F	I	E	N	V	Y	A	N	Q	I	A	F	G	R	L	Y	R	E	K	L	K	E	Q	V	E	A	L	G	Y	E	T	E	V	V	G	K	H	G	M	W	E	M	P	G	V	P	V	E	A	.	.	.	F	S	G	R
Query Conservation								.																																																																			.	.	.
Alig confidence								.											.	.	.	.	.	.	.	.	.																																	.															.	.	.
Template Conservation																			.	.	.	.	.	.	.	.	.																																	.
Template Sequence		I	L	N	X	T	K	R	S	D	G	Q	W	R	A	L	K	N	.	.	.	.	.	.	.	.	.	D	E	I	V	K	A	T	R	Y	L	G	A	V	Y	N	A	E	L	A	H	E	L	Q	K	L	G	Y	Q	L	R	Y	G	.	K	D	G	N	F	D	L	A	H	I	D	R	Q	Q	I	E	G	F	S	K	R
Template Known Secondary structure				S					T	T	S						B		.	.	.	.	.	.	.	.	.						T																			T	T							.	S	S	S					T	T	S							T	T
Template Predicted Secondary structure																			.	.	.	.	.	.	.	.	.																																	.
Template SS confidence
		166	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.										.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.		.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.
		238	.	240	.	.	.	.	.	.	.	.	.							250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.
Predicted Secondary structure														.	.	.	.	.	.
Query SS confidence														.	.	.	.	.	.
Query Sequence		S	Q	T	I	R	E	A	V	G	E	D	A	.	.	.	.	.	.	S	L	K	S	R	D	V	A	A	L	D	T	R	K	S	K	Q	H	V	D	P	E	I	K	M	A	E	W	M	Q	T	L	K	E	T	G	F	D	I
Query Conservation														.	.	.	.	.	.
Alig confidence														.	.	.	.	.	.
Template Conservation
Template Sequence		T	E	Q	I	A	E	W	Y	A	A	R	G	L	D	P	N	S	V	S	L	E	Q	K	Q	A	A	K	V	L	S	R	A	K	K	T	S	V	D	R	E	A	L	R	A	E	W	Q	A	T	A	K	E	L	G	I	D	F
Template Known Secondary structure													T			T	T	T													T																							T	T
Template Predicted Secondary structure
Template SS confidence
		236	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions