 |
Job Description | P14565 | Confidence | 96.81% | Date | Wed Jan 25 15:20:38 GMT 2012 |
Rank | 170 | Aligned Residues | 65 |
% Identity | 14% | Template | c3tbkA_ |
PDB info |
PDB header:hydrolase | Chain: A: PDB Molecule:rig-i helicase domain; |
PDBTitle: mouse rig-i atpase domain
|
Resolution | 2.14 Å |
|
 |
  |   |
969 | 970 | . | . | . | . | . | . | . | . | . | 980 | . | . | . | . | . | . | . | . | . | 990 | . | . | . | . | . | . | . | . | . | |
1000 | . | . | . | . | . | . | . | . | . | 1010 | . | . | . | . | . | . | . | . | . | 1020 | . | . | . | . | . | . | . | . | . | 1030 | . | . | . | . | . |
Predicted Secondary structure |   |
|
|  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |
|
|
|
|
|
|  |  | . |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |
|
|  |  |  |  |  |  |  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
L | T | S | G | Q | R | A | A | T | R | M | I | L | E | T | S | D | R | F | T | V | V | Q | G | Y | A | G | V | G | K | T | . |
T | Q | F | R | A | V | M | S | A | V | N | M | L | P | E | S | E | R | P | R | V | V | G | L | G | P | T | H | R | A | V | G | E | M | R | S |
Query Conservation |   |
|
|   |   |
|   |   |
|
|   |   |
|
|
|
|   |
|
|   |   |   |
|   |
|   |
|
|
|
|
|
| . |
|   |
|   |
|
|   |   |   |
|   |   |   |   |   |   |   |
|   |   |
|   |   |
|
|
|
|   |
|
|
|   |   |
|   |   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . |
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
|
|   |
|
|   |   |   |
|   |   |   |
|   |   |   |   | . | . |   |
|
|   |   |   |
|
|
|
|
|
|   |   |
|   |   |   |
|   |   |   |
|   |   |   |   |   |   |   |   |   |   |   |
|
|
|   |
|   |   |   |
|   |   |
|   |   |   |
Template Sequence |   |
P | R | N | Y | Q | L | E | L | A | L | P | A | K | K | G | K | N | . |
. |
T | I | I | C | A | P | T | G | C | G | K | T | F | V | S | L | L | I | C | E | H | H | L | K | K | F | P | C | G | Q | K | G | K | V | V | F | F | A | N | Q | I | P | V | Y | E | Q | Q | A | T |
Template Known Secondary structure |   |
|
|  |  |  |  |  |  |  |  |  |  |  | T | T |
|
| . | . |  |  |  |  |
|
| T | T | S |
|  |  |  |  |  |  |  |  |  |  |  |  |  |  | T |
|
| S | S |
|
|
|
|  |  |  |  |
| S | S |  |  |  |  |  |  |  |  |  |
Template Predicted Secondary structure |   |
|
|  |  |  |  |  |  |  |  |  |  |  |
|
|
|
| . | . |  |  |  |  |
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|  |  |  |  |  |
|
|
|  |  |  |  |  |  |  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
244 | . | . | . | . | . | 250 | . | . | . | . | . | . | . | . | . | 260 | |
|
. | . | . | . | . | . | . | . | . | 270 | . | . | . | . | . | . | . | . | . | 280 | . | . | . | . | . | . | . | . | . | 290 | . | . | . | . | . | . | . | . | . | 300 | . | . | . | . | . | . | . | . | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|