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Job DescriptionP14565
Confidence94.70%DateWed Jan 25 15:20:38 GMT 2012
Rank344Aligned Residues139
% Identity16%Templatec3mwyW_
PDB info PDB header:hydrolaseChain: W: PDB Molecule:chromo domain-containing protein 1; PDBTitle: crystal structure of the chromodomain-atpase portion of the yeast chd12 chromatin remodeler
Resolution3.70 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   969970.........980.. .......990.........1000.........1010.........1020.........1030.........1040......
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Query Sequence  LTSGQRAATRMILE. . TSDRFTVVQGYAGVGKTTQFRAVMSAVNMLPESERPRVVGLGPTHRAVGEMRSAGVDAQTLASF
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Template Sequence  LRDFQLTGINWMAFLWSKGDNGILADEMGLGKTVQTVAFISWLIFARRQNGP. HIIVVPLSTMPAWLDT. . . . . . . FEKW
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   376...380.........390.........400.........410.........420....... ..430.........440... ....
 
   1047..1050.........1060... ......1070.........1080.........
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Query Sequence  LHDTQLQQRSGETPDFS. . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . NTLFLLDESSMVGNTDMARAYALIAA
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Template Sequence  APDLNCICYMGNQKSRDTIREYEFYTNPKTMKFNVLLTTYEYILKDRAELGSIKWQFMAVDEAHRLKNAESSLYESLNSF
Template Known Secondary structure  STT




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TTTTSTTGGGG

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   448.450.........460.........470.........480.........490.........500.........510.........520.......
 
   1090. ........1100.........1110.....
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Query Sequence  GG. GRAVASGDTDQLQAIAPGQPFRLQ
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Template Sequence  KVANRMLITGTPLQNNIKELAALVNFL
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   533......540.........550.........
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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