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Job DescriptionP14565
Confidence97.89%DateWed Jan 25 15:20:38 GMT 2012
Rank47Aligned Residues151
% Identity14%Templatec3llmB_
PDB info PDB header:hydrolaseChain: B: PDB Molecule:atp-dependent rna helicase a; PDBTitle: crystal structure analysis of a rna helicase
Resolution2.80 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   938.940.........950.........960.........970.........980.........990.........1000.. .......1010......
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Query Sequence  EAEKSILRHILEGKEAVMPLMERVPGELMEKLTSGQRAATRMILETSDRFTVVQGYAGVGKTTQF. RAVMSAVNMLPESE
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Template Sequence  QISXDLKNELXYQLEQDHDLQAILQERELLPVKKFESEILEAISQN. . SVVIIRGATGCGKTTQVPQFILDDFIQNDRAA
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TSGGGGG
..S

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GG
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   359360.........370.........380.........390.........400.... .....410.........420.........430......
 
   1017..1020.........1030...... ...1040.........1050.........1060........
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Query Sequence  RPRVVGLGPTHRAVGEMRSA. . . . . . . . . . . . . . . . . . . . . . . . . . . . GVDAQTLASFLHDTQLQQRSGETPDFSNTLFL
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Template Sequence  ECNIVVTQPRRISAVSVAERVAFERGEEPGKSCGYSVRFESILPRPHASIXFCTVGVLLRKLEA. . . . . . . GIRGISHVI
Template Known Secondary structure  G
SSTTT

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   437..440.........450.........460.........470.........480.........490.........500 .........
 
   10691070.. .......1080......... 1090.......
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Query Sequence  LDES. . SMVGNTDMARAYALIAA. . GGGRAVAS
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Template Sequence  VDEIHERDINTDFLLVVLRDVVQAYPEVRIVLX
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   510.........520.........530.........540..
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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