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Job DescriptionP14565
Confidence100.00%DateWed Jan 25 15:20:38 GMT 2012
Rank3Aligned Residues190
% Identity41%Templatec3l6tB_
PDB info PDB header:hydrolaseChain: B: PDB Molecule:mobilization protein trai; PDBTitle: crystal structure of an n-terminal mutant of the plasmid pcu1 trai2 relaxase domain
Resolution1.93 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   22..... ..30.........40.........50.........60.........70.........80.........90........
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Query Sequence  NYYVLG. . . SMGERWAGRGAEQLGLQGSVDKDVFTRLLEGRLPDGADLSRMQDGSNRHRPGYDLTFSAPKSVSMMAMLGG
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Template Sequence  TITRQNVTSVVFTSWQGTGAEALGLSGDVESARFKELLVGEIDTFTHMQRHKK. . . . ERLGYDLTFSAPKGVSMQALIHG
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   6...10.........20.........30.........40.........50........ .60.........70.........80.
 
   99100.........110.........120.........130.........140.........150.........160....... ..170.......
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Query Sequence  DKRLIDAHNQAVDFAVRQVEALASTRVMTDGQSETVLTGNLVMALFNHDTSRDQEPQLHTHAVVANVTQ. HNGEWKTLSS
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Template Sequence  DKTIIEAHEKAVAAAVREAEKLAQARTTRQGKSVTQNTNNLVVATFRHETL. . . DPDLHTHAFVMNMTQREDGQWRALKN
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   102.......110.........120.........130.........140.........150.. .......160.........170........
 
   178.180.........190.........200.........210.........220.......
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Query Sequence  DKVGKTGFIENVYANQIAFGRLYREKLKEQVEALGYETEVVGKHGMWEMP
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Template Sequence  . . . . . . . . . DELMRNKMHLGDVYKQELALELTKAGYELRYNSKNNTFDMA
Template Known Secondary structure  .........TTT

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   182.......190.........200.........210.........220..
 
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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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