Job Description P14565 Confidence 100.00% Date Wed Jan 25 15:20:38 GMT 2012 Rank 3 Aligned Residues 190 % Identity 41% Template c3l6tB_ PDB info PDB header:hydrolase Chain: B: PDB Molecule:mobilization protein trai; PDBTitle: crystal structure of an n-terminal mutant of the plasmid pcu1 trai2 relaxase domain Resolution 1.93 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		22	.	.	.	.	.				.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.
Predicted Secondary structure								.	.	.
Query SS confidence								.	.	.
Query Sequence		N	Y	Y	V	L	G	.	.	.	S	M	G	E	R	W	A	G	R	G	A	E	Q	L	G	L	Q	G	S	V	D	K	D	V	F	T	R	L	L	E	G	R	L	P	D	G	A	D	L	S	R	M	Q	D	G	S	N	R	H	R	P	G	Y	D	L	T	F	S	A	P	K	S	V	S	M	M	A	M	L	G	G
Query Conservation								.	.	.
Alig confidence								.	.	.																																													.	.	.	.
Template Conservation																																																							.	.	.	.
Template Sequence		T	I	T	R	Q	N	V	T	S	V	V	F	T	S	W	Q	G	T	G	A	E	A	L	G	L	S	G	D	V	E	S	A	R	F	K	E	L	L	V	G	E	I	D	T	F	T	H	M	Q	R	H	K	K	.	.	.	.	E	R	L	G	Y	D	L	T	F	S	A	P	K	G	V	S	M	Q	A	L	I	H	G
Template Known Secondary structure									T	T								S						T	T			S	S											T	T				T	T									.	.	.	.																					T	S
Template Predicted Secondary structure																																																							.	.	.	.
Template SS confidence
		6	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.					.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.
		99	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.		.	.	170	.	.	.	.	.	.	.
Predicted Secondary structure																																																																							.
Query SS confidence																																																																							.
Query Sequence		D	K	R	L	I	D	A	H	N	Q	A	V	D	F	A	V	R	Q	V	E	A	L	A	S	T	R	V	M	T	D	G	Q	S	E	T	V	L	T	G	N	L	V	M	A	L	F	N	H	D	T	S	R	D	Q	E	P	Q	L	H	T	H	A	V	V	A	N	V	T	Q	.	H	N	G	E	W	K	T	L	S	S
Query Conservation																																																																							.
Alig confidence																																																					.	.	.																.
Template Conservation																																																					.	.	.
Template Sequence		D	K	T	I	I	E	A	H	E	K	A	V	A	A	A	V	R	E	A	E	K	L	A	Q	A	R	T	T	R	Q	G	K	S	V	T	Q	N	T	N	N	L	V	V	A	T	F	R	H	E	T	L	.	.	.	D	P	D	L	H	T	H	A	F	V	M	N	M	T	Q	R	E	D	G	Q	W	R	A	L	K	N
Template Known Secondary structure																						T	T								T	T																					.	.	.												S					S	S	S
Template Predicted Secondary structure																																																					.	.	.
Template SS confidence
		102	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.				.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.
		178	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		D	K	V	G	K	T	G	F	I	E	N	V	Y	A	N	Q	I	A	F	G	R	L	Y	R	E	K	L	K	E	Q	V	E	A	L	G	Y	E	T	E	V	V	G	K	H	G	M	W	E	M	P
Query Conservation
Alig confidence		.	.	.	.	.	.	.	.	.
Template Conservation		.	.	.	.	.	.	.	.	.
Template Sequence		.	.	.	.	.	.	.	.	.	D	E	L	M	R	N	K	M	H	L	G	D	V	Y	K	Q	E	L	A	L	E	L	T	K	A	G	Y	E	L	R	Y	N	S	K	N	N	T	F	D	M	A
Template Known Secondary structure		.	.	.	.	.	.	.	.	.						T																			T	T							T	T	T	T
Template Predicted Secondary structure		.	.	.	.	.	.	.	.	.
Template SS confidence
											182	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions