Return to main results Retrieve Phyre Job Id

Job DescriptionP14565
Confidence99.64%DateWed Jan 25 15:20:38 GMT 2012
Rank18Aligned Residues152
% Identity100%Templatec3fldA_
PDB info PDB header:hydrolaseChain: A: PDB Molecule:protein trai; PDBTitle: crystal structure of the trai c-terminal domain
Resolution2.40 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   1476...1480.........1490.........1500.........1510.........1520.........1530.........1540.........1550.....
Predicted Secondary structure 




















































Query SS confidence 















































































Query Sequence  REVMNAERLFSTARELRDVAAGRAVLRQAGLAGGDSPARFIAPGRKYPQPYVALPAFDRNGKSAGIWLNPLTTDDGNGLR
Query Conservation                        
                                        
                
Alig confidence 















































































Template Conservation   
   
  

  
 

  

 


 

  

    
 

 
  




 
 






 


 


 
  
         
Template Sequence  REVMNAERLFSTARELRDVAAGRAVLRQAGLAGGDSPARFIAPGRKYPQPYVALPAFDRNGKSAGIWLNPLTTDDGNGLR
Template Known Secondary structure 
S
BGGGST
TTS



B





SS



TTS

TTT
Template Predicted Secondary structure 







































Template SS confidence 















































































   1476...1480.........1490.........1500.........1510.........1520.........1530.........1540.........1550.....
 
   1556...1560.........1570.........1580.........1590.........1600.........1610.........1620.......
Predicted Secondary structure 






































Query SS confidence 







































































Query Sequence  GFSGEGRVKGSGDAQFVALQGSRNGESLLADNMQDGVRIARDNPDSGVVVRIAGEGRPWNPGAITGGRVWGD
Query Conservation                                                                 
        
Alig confidence 







































































Template Conservation     

 
   
  
   
 


 

 

 

 
  

  

  

 



   
         




    
Template Sequence  GFSGEGRVKGSGDAQFVALQGSRNGESLLADNMQDGVRIARDNPDSGVVVRIAGEGRPWNPGAITGGRVWGD
Template Known Secondary structure 


S


TT



SSSSS
TTSSS
SS

S
GGGTTS



Template Predicted Secondary structure 


































Template SS confidence 







































































   1556...1560.........1570.........1580.........1590.........1600.........1610.........1620.......
 
Download:Text version FASTA pairwise alignment 3D Model in PDB format

View in Jmol

Send structure to FirstGlance for more viewing options


Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions