Return to main results Retrieve Phyre Job Id

Job DescriptionP14565
Confidence94.26%DateWed Jan 25 15:20:38 GMT 2012
Rank381Aligned Residues80
% Identity20%Templatec3fhcB_
PDB info PDB header:transport protein/hydrolaseChain: B: PDB Molecule:atp-dependent rna helicase ddx19b; PDBTitle: crystal structure of human dbp5 in complex with nup214
Resolution2.80 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   955....960.........970.........980.........990.........1000.........1010.........1020.........1030....
Predicted Secondary structure 




















Query SS confidence 















































































Query Sequence  MPLMERVPGELMEKLTSGQRAATRMILETSDRFTVVQGYAGVGKTTQFRAVMSAVNMLPESERPRVVGLGPTHRAVGEMR
Query Conservation   

           

  
  

  



 

   
 
 






 
 

   
       
  
  



 


  
 
Alig confidence 















































.






























Template Conservation    
   
   
    
 

  


 

   
 



 
 






 
. 



  
                       
Template Sequence  PQLLQGVYAMGFNRPSKIQENALPLMLAEPPQNLIAQSQSGTGKTAAF. VLAMLSQVEPANKYPQCLCLSPTYELALQTG
Template Known Secondary structure  TT

S

SSS





S.

TTS
S


SS
Template Predicted Secondary structure 

















.













Template SS confidence 















































































   101........110.........120.........130.........140........ .150.........160.........170.........
 
   1035
Predicted Secondary structure 
Query SS confidence 
Query Sequence  S
Query Conservation   
Alig confidence 
Template Conservation   
Template Sequence  K
Template Known Secondary structure 
Template Predicted Secondary structure 
Template SS confidence 
   180
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions