 |
Job Description | P14565 | Confidence | 92.76% | Date | Wed Jan 25 15:20:38 GMT 2012 |
Rank | 431 | Aligned Residues | 85 |
% Identity | 11% | Template | c3f8tA_ |
PDB info |
PDB header:hydrolase | Chain: A: PDB Molecule:predicted atpase involved in replication control, |
PDBTitle: crystal structure analysis of a full-length mcm homolog2 from methanopyrus kandleri
|
Resolution | 1.90 Å |
|
 |
  |   |
988 | . | 990 | . | . | . | . | . | . | . | . | . | 1000 | . | . | . | . | . | . | . | . | . | 1010 | . | . | . | . | . | . | . | . | . | 1020 | . | . | . | . | . | . | . | . | . | 1030 | . | . | . | . | . | . | . | . | . | 1040 | . | . | . | . | . | . | . | . | . | 1050 | . | . | . | . | . | . | . | . | . | 1060 | . | . | . | . | . | . | . |
Predicted Secondary structure |   |
 |  |  |  |
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |
|
|  |  |  |  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
T | V | V | Q | G | Y | A | G | V | G | K | T | T | Q | F | R | A | V | M | S | A | V | N | M | L | P | E | S | E | R | P | R | V | V | G | L | G | P | T | H | R | A | V | G | E | M | R | S | A | G | V | D | A | Q | T | L | A | S | F | L | H | D | T | Q | L | Q | Q | R | S | G | E | T | P | D | F | S | N | T | L | F |
Query Conservation |   |
  |   |
|   |
|   |
|
|
|
|
|
|
|   |
|   |
|
|   |   |   |
|   |   |   |   |   |   |   |
|   |   |
|   |   |
|
|
|
|   |
|
|
|   |   |
|   |   |   |
|
|   |
|   |
|
|
|
|   |
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|
|
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
|
|
|
|
|
|
|
|
|
|
|
|   |
|
|   |   |   |   |   | . | . | . | . | . | . | . |   |   |
|
|   |   |   |   |   |
|   |   |   |
|   |   |
|
| . | . | . | . | . | . | . | . | . | . |
|
|   |
|   |   |
|   |   |   |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Sequence |   |
V | L | L | A | G | Y | P | V | V | C | S | E | I | L | H | H | V | L | D | H | . |
. |
. |
. |
. |
. |
. |
L | A | P | R | G | V | Y | V | D | L | R | R | T | E | L | T | D | L | . |
. |
. |
. |
. |
. |
. |
. |
. |
. |
T | A | V | L | K | E | D | R | G | W | A | L | R | A | G | A | A | V | L | A | D | G | G | I | L |
Template Known Secondary structure |   |
 |  |  |  | S |
|  |  |  |  |  |  |  |  |  |  |  |  |  |  | . | . | . | . | . | . | . | T |
| S | S |  |  |  |  |  | G | G | G |
|
|  |  |  |  | . | . | . | . | . | . | . | . | . | . | S |  |  |  |  |  | S | S | S |  |  |  |  |  |
|  |  |  |  | T | T | T | S |  |  |
Template Predicted Secondary structure |   |
 |  |  |  |
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  | . | . | . | . | . | . | . |  |
|
|
|
|  |  |  |  |
|
|
|
|
|
|
|
|  | . | . | . | . | . | . | . | . | . | . |  |  |  |  |  |  |  |
|
|  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
242 | . | . | . | . | . | . | . | 250 | . | . | . | . | . | . | . | . | . | 260 | . | |
|
|
|
|
|
|
. | . | . | . | . | . | . | . | 270 | . | . | . | . | . | . | . | . | . | |
|
|
|
|
|
|
|
|
|
280 | . | . | . | . | . | . | . | . | . | 290 | . | . | . | . | . | . | . | . | . | 300 | . | . | . | . |
  |
  |   |
1068 | . | 1070 | . | . | . | . | . | . | . | . | . | 1080 | . | . | . | . | . | . | . | . | . |
Predicted Secondary structure |   |
 |  |  |
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
L | L | D | E | S | S | M | V | G | N | T | D | M | A | R | A | Y | A | L | I | A | A |
Query Conservation |   |
|
|
|
|
|
|
|
|   |   |   |   |   |   |   |
|
|   |   |
|   |   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |
|
|
|
|
|
|
|   |   |   |   |   |   |
|
|   |
|
|
|
|
|
Template Sequence |   |
A | V | D | H | L | E | G | A | P | E | P | H | R | W | A | L | M | E | A | M | D | K |
Template Known Secondary structure |   |
 |  |  |
|
| T | T |
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |
Template Predicted Secondary structure |   |
 |  |  |  |
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
305 | . | . | . | . | 310 | . | . | . | . | . | . | . | . | . | 320 | . | . | . | . | . | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|