|   |
968 | . | 970 | . | . | . | . | . | . | . | . | . | 980 | . | . | . | . | . | . | . | . | . | 990 | . | . | . | . | . | . | . | . | . | 1000 | . | . | . | . | . | . | . | . | . | 1010 | . | . | . | . | . | . | . | . | . | 1020 | . | . | . | . | . | . | . | . | . | 1030 | . | . | . | . | . | |
|
. | . | . | . | 1040 | . | . | . | . | . |
Predicted Secondary structure |   |
|
|
|  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |
|
|  |  |  |  |  |  |  |  |  | . | . |
|
|
|
|
|  |  |  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
K | L | T | S | G | Q | R | A | A | T | R | M | I | L | E | T | S | D | R | F | T | V | V | Q | G | Y | A | G | V | G | K | T | T | Q | F | R | A | V | M | S | A | V | N | M | L | P | E | S | E | R | P | R | V | V | G | L | G | P | T | H | R | A | V | G | E | M | R | S | . |
. |
A | G | V | D | A | Q | T | L | A | S |
Query Conservation |   |
  |
|
|   |   |
|   |   |
|
|   |   |
|
|
|
|   |
|
|   |   |   |
|   |
|   |
|
|
|
|
|
|
|   |
|   |
|
|   |   |   |
|   |   |   |   |   |   |   |
|   |   |
|   |   |
|
|
|
|   |
|
|
|   |   |
|   |   | . | . |   |
|
|   |
|   |
|
|
|
|
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . |
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
|
|
|   |   |
|   |   |
|
|   |   |   |   |   | . | . |   |   |   |   |   |
|   |
|
|
|
|
|
|
|
|   |   |   |   |   |   |   |   |   |
|   | . | . |   |   |   |   |   |   |   |
|
|   |   |
|   |
|   |   |
|   |   |   |
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |
Template Sequence |   |
P | K | T | L | G | Q | K | H | Y | V | D | A | I | D | T | . |
. |
N | T | I | V | F | G | L | G | P | A | G | S | G | K | T | Y | L | A | X | A | K | A | V | Q | A | L | . |
. |
Q | S | K | Q | V | S | R | I | I | L | T | R | P | A | V | E | A | G | E | K | L | G | F | L | P | G | D | P | Y | L | R | P | L | H | D |
Template Known Secondary structure |   |
|
| S |  |  |  |  |  |  |  |  |  |  |  |  | . | . |
| S |  |  |  |  |  |
|
| T | T | S | S | T | T |  |  |  |  |  |  |  |  |  |  |  | . | . |  | T | T | S |
| S |  |  |  |  |  |  |
| S |
|
| T | T |
|
|
|
| S | S |
|
|
| T | T | T |  |  |  |  |  |
Template Predicted Secondary structure |   |
|
|
|  |  |  |  |  |  |  |  |  |  |  |
| . | . |
|
|  |  |  |  |  |
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  | . | . |  |  |
|
|
|
|  |  |  |  |  |  |
|
|  |  |  |  |  |  |  |  |  |  |  |
|
|  |  |  |  |  |  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
119 | 120 | . | . | . | . | . | . | . | . | . | 130 | . | . | . | |
|
. | . | . | . | . | . | 140 | . | . | . | . | . | . | . | . | . | 150 | . | . | . | . | . | . | . | . | . | |
|
160 | . | . | . | . | . | . | . | . | . | 170 | . | . | . | . | . | . | . | . | . | 180 | . | . | . | . | . | . | . | . | . | 190 | . | . | . | . |
  |
  |   |
1046 | . | . | . | 1050 | . | . | . | . | |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
. | . | . | . | . | 1060 | . | . | . | . | . | . | . | . | . | 1070 | . | . | . | . | . | . | . | . | . | 1080 | . | . | . | . | . | . | . | . | . | 1090 | . | . | . | . | . | . | . | . | . | 1100 | . | . | . | . | . | . | . | . | . |
Predicted Secondary structure |   |
 |  |  |
|
|
|
|
|
| . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |
|
|  |  |  |
|
|
|
|
|
|
|
Query SS confidence |   |
|
|
|
|
|
|
|
|
| . |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
F | L | H | D | T | Q | L | Q | Q | . |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
R | S | G | E | T | P | D | F | S | N | T | L | F | L | L | D | E | S | S | M | V | G | N | T | D | M | A | R | A | Y | A | L | I | A | A | G | G | G | R | A | V | A | S | G | D | T | D | Q | L | Q | A | I | A | P | G |
Query Conservation |   |
  |
|   |   |   |   |   |   |   | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . |   |   |   |   |   |   |   |   |   |   |   |
|
|
|
|
|
|
|
|
|
|   |   |   |   |   |   |   |
|
|   |   |
|   |   |   |
|
|
|
|
|
|
|
|
|   |   |
|
|   |
|
|
|
|
|
Alig confidence |   |
|
|
|
|
|
|
|
|
| . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . |
Template Conservation |   |
  |
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|
|
|
|
|
|
|   |   |   |   |   |   |   |   |   |   |
|   |   |   |   |   | . |   |   |
|   |
|
|   |
|
|   |   |
|
| . | . | . | . | . | . |
Template Sequence |   |
A | L | R | D | X | V | E | P | E | V | I | P | K | L | X | E | A | G | I | V | E | V | A | P | L | A | Y | X | R | G | R | T | L | N | D | A | F | V | I | L | D | E | A | Q | N | T | T | P | A | Q | X | K | X | F | L | T | R | L | G | F | . |
G | S | K | X | V | V | T | G | D | G | L | R | L | . |
. |
. |
. |
. |
. |
Template Known Secondary structure |   |
 |  | T | T | T | S |
| T | T |  |  |  |  |  |  |  | T | T | S |  |  |  |  |  | G | G | G | G | T | T |
|
| B |
| S |  |  |  |  |  |
| S | G | G | G |
|
|  |  |  |  |  |  |  |  | T | T | B |
| T | . | T |
|  |  |  |  |  |  |
|
|
|  |  | . | . | . | . | . | . |
Template Predicted Secondary structure |   |
 |  |  |  |
|
|
|  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|  |  |  |  |  |
|  |  |  |
|
|  |  |  |  |  |  |  |  |  |  |
|
|
| . |
|
|  |  |  |  |  |
|
|  |  |  |  | . | . | . | . | . | . |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
201 | . | . | . | . | . | . | . | . | 210 | . | . | . | . | . | . | . | . | . | 220 | . | . | . | . | . | . | . | . | . | 230 | . | . | . | . | . | . | . | . | . | 240 | . | . | . | . | . | . | . | . | . | 250 | . | . | . | . | . | . | . | . | . | 260 | |
. | . | . | . | . | . | . | . | . | 270 | . | . | . | |
|
|
|
|
|
  |
  |   |
1110 | . | . | . | . | . | . | . | . | . | 1120 | . | . | . | . | . | . | . | |
|
. | . | 1130 | . | . |
Predicted Secondary structure |   |
|  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  | . | . |  |  |  |  |
|
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
|
|
|
|
|
Query Sequence |   |
Q | P | F | R | L | Q | Q | T | R | S | A | A | D | V | A | I | M | K | . |
. |
E | I | V | R | Q |
Query Conservation |   |
  |   |
|   |   |
|   |   |   |   |   |   |   |   |   |   |
|   | . | . |
|
|   |
|
|
Alig confidence |   |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . |
|
|
|
|
|
Template Conservation |   |
. |   |   |   |   |
|   |   |   |   |   |   |   |   |   |   |
|   |   |   |
|
|
|
|   |
Template Sequence |   |
. |
V | R | H | I | L | R | G | V | D | D | V | H | F | S | E | L | T | S | S | D | V | V | R | H |
Template Known Secondary structure |   |
. |  |  |  |  | T | T | T |
| T | T |  |  |  |  |  |
|
| G | G | G |
|
|
|
|
Template Predicted Secondary structure |   |
. |  |  |  |  |  |
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |
|
|
|  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
|
286 | . | . | . | 290 | . | . | . | . | . | . | . | . | . | 300 | . | . | . | . | . | . | . | . | . |
  |