Job Description P14565 Confidence 97.93% Date Wed Jan 25 15:20:38 GMT 2012 Rank 42 Aligned Residues 107 % Identity 22% Template c2z83A_ PDB info PDB header:viral protein Chain: A: PDB Molecule:helicase/nucleoside triphosphatase; PDBTitle: crystal structure of catalytic domain of japanese2 encephalitis virus ns3 helicase/nucleoside triphosphatase3 at a resolution 1.8 Resolution 1.80 Å

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		981	.	.	.	.	.	.	.	.	990	.	.	.	.	.	.	.	.	.		1000	.	.	.	.	.	.	.	.	.	1010	.	.	.	.	.	.	.	.	.	1020	.	.	.	.	.	.	.	.	.	1030	.	.	.	.	.			.	.	.	.	1040												.	.	.	.	.	.
Predicted Secondary structure																					.																																					.	.						.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																					.																																					.	.						.	.	.	.	.	.	.	.	.	.	.
Query Sequence		L	E	T	S	D	R	F	T	V	V	Q	G	Y	A	G	V	G	K	T	.	T	Q	F	R	A	V	M	S	A	V	N	M	L	P	E	S	E	R	P	R	V	V	G	L	G	P	T	H	R	A	V	G	E	M	R	S	.	.	A	G	V	D	A	.	.	.	.	.	.	.	.	.	.	.	Q	T	L	A	S	F
Query Conservation																					.																																					.	.						.	.	.	.	.	.	.	.	.	.	.
Alig confidence																					.												.	.	.	.																						.	.						.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																	.	.	.	.
Template Sequence		M	L	R	K	R	Q	M	T	V	L	D	L	H	P	G	S	G	K	T	R	K	I	L	P	Q	I	I	K	D	A	I	.	.	.	.	Q	Q	R	L	R	T	A	V	L	A	P	T	R	V	V	A	A	E	M	A	E	A	L	R	G	L	P	V	R	Y	Q	T	G	N	E	I	V	D	V	M	C	H	A	T	L
Template Known Secondary structure		G	G	S	T	T									T	T	S		T	T	T	T											.	.	.	.		T	T									S											T	T	T	S										S
Template Predicted Secondary structure																																	.	.	.	.
Template SS confidence
		183	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.					.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.
		1047	.	.	1050	.	.	.	.	.	.	.	.	.	1060	.	.	.	.	.	.	.	.	.	1070	.	.	.	.	.	.	.	.	.	1080	.				.	.	.	.	.	.	.	.	1090	.	.	.	.	.	.	.
Predicted Secondary structure																																					.	.	.
Query SS confidence																																					.	.	.
Query Sequence		L	H	D	T	Q	L	Q	Q	R	S	G	E	T	P	D	F	S	N	T	L	F	L	L	D	E	S	S	M	V	G	N	T	D	M	A	.	.	.	R	A	Y	A	L	I	A	A	G	G	G	R	A	V	A	S
Query Conservation																																					.	.	.
Alig confidence										.	.	.	.	.	.																						.	.	.
Template Conservation										.	.	.	.	.	.
Template Sequence		T	H	R	L	M	S	P	N	.	.	.	.	.	.	V	P	N	Y	N	L	F	V	M	D	E	A	H	F	T	D	P	A	S	I	A	A	R	G	Y	I	A	T	K	V	E	L	G	E	A	A	A	I	F	M
Template Known Secondary structure							S			.	.	.	.	.	.					S					S	S	T	T			S																T	T	S
Template Predicted Secondary structure										.	.	.	.	.	.
Template SS confidence
		267	.	.	270	.	.	.	.							.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions