Job Description P14565 Confidence 97.38% Date Wed Jan 25 15:20:38 GMT 2012 Rank 105 Aligned Residues 112 % Identity 15% Template c2z4rB_ PDB info PDB header:dna binding protein Chain: B: PDB Molecule:chromosomal replication initiator protein dnaa; PDBTitle: crystal structure of domain iii from the thermotoga2 maritima replication initiation protein dnaa Resolution 3.05 Å

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		974	.	.	.	.	.	980	.	.	.	.	.	.			.	.	.	990	.	.	.	.	.	.	.	.	.	1000	.	.	.	.	.	.	.	.	.	1010	.	.	.	.	.	.	.	.	.	1020	.	.	.	.	.	.	.	.	.	1030	.	.	.	.	.	.	.	.	.	1040	.	.	.	.	.	.	.	.	.	1050	.
Predicted Secondary structure															.	.
Query SS confidence															.	.
Query Sequence		R	A	A	T	R	M	I	L	E	T	S	D	R	.	.	F	T	V	V	Q	G	Y	A	G	V	G	K	T	T	Q	F	R	A	V	M	S	A	V	N	M	L	P	E	S	E	R	P	R	V	V	G	L	G	P	T	H	R	A	V	G	E	M	R	S	A	G	V	D	A	Q	T	L	A	S	F	L	H	D	T	Q
Query Conservation															.	.
Alig confidence															.	.																										.	.	.																																		.	.	.	.
Template Conservation																																										.	.	.																																		.	.	.	.
Template Sequence		Y	H	A	A	L	E	V	A	K	H	P	G	R	Y	N	P	L	F	I	Y	G	G	V	G	L	G	K	T	H	L	L	Q	S	I	G	N	Y	V	V	Q	.	.	.	N	E	P	D	L	R	V	M	Y	I	T	S	E	K	F	L	N	D	L	V	D	S	M	K	E	G	K	L	N	E	F	R	E	.	.	.	.
Template Known Secondary structure											S	T	T	T	S								S	S	S	S	S															.	.	.		S	S	S	S																				T	S								.	.	.	.
Template Predicted Secondary structure																																										.	.	.																																		.	.	.	.
Template SS confidence
		117	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.				.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.
		1052	.	.	.	.	.	.	.	1060	.	.	.	.	.	.	.	.	.	1070	.	.	.	.	.	.	.						.	.	1080	.	.	.	.	.	.	.	.	.	1090	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																												.	.	.	.	.
Query SS confidence																												.	.	.	.	.
Query Sequence		L	Q	Q	R	S	G	E	T	P	D	F	S	N	T	L	F	L	L	D	E	S	S	M	V	G	N	.	.	.	.	.	T	D	M	A	R	A	Y	A	L	I	A	A	G	G	G	R	A	V	A	S	G	D
Query Conservation																												.	.	.	.	.
Alig confidence		.	.	.	.	.	.	.																				.	.	.	.	.
Template Conservation		.	.	.	.	.	.	.
Template Sequence		.	.	.	.	.	.	.	K	Y	R	K	K	V	D	I	L	L	I	D	D	V	Q	F	L	I	G	K	T	G	V	Q	T	E	L	F	H	T	F	N	E	L	H	D	S	G	K	Q	I	V	I	C	S	D
Template Known Secondary structure		.	.	.	.	.	.	.			T	T	T		S							G	G	G	G	T	T																	T	T	T								S
Template Predicted Secondary structure		.	.	.	.	.	.	.
Template SS confidence
									190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions