Job Description P14565 Confidence 98.59% Date Wed Jan 25 15:20:38 GMT 2012 Rank 25 Aligned Residues 108 % Identity 25% Template c2vbcA_ PDB info PDB header:hydrolase Chain: A: PDB Molecule:dengue 4 ns3 full-length protein; PDBTitle: crystal structure of the ns3 protease-helicase from dengue2 virus Resolution 3.15 Å

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		981	.	.	.	.	.	.	.	.	990	.	.	.	.	.	.	.	.	.	1000		.	.	.	.	.	.	.	.	.	1010	.	.	.	.	.	.	.	.	.	1020	.	.	.	.	.	.	.	.	.	1030	.	.	.	.	.	.																						.	.
Predicted Secondary structure																						.																																					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																						.																																					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		L	E	T	S	D	R	F	T	V	V	Q	G	Y	A	G	V	G	K	T	T	.	Q	F	R	A	V	M	S	A	V	N	M	L	P	E	S	E	R	P	R	V	V	G	L	G	P	T	H	R	A	V	G	E	M	R	S	A	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	G	V
Query Conservation																						.																																					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																						.											.	.	.	.																							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																	.	.	.	.
Template Sequence		I	F	R	K	K	R	L	T	I	M	D	L	H	P	G	A	G	K	T	K	R	I	L	P	S	I	V	R	E	A	L	.	.	.	.	K	R	R	L	R	T	L	I	L	A	P	T	R	V	V	A	A	E	M	E	E	A	L	R	G	L	P	I	R	Y	Q	T	P	A	V	K	S	D	H	T	G	R	E	I	V
Template Known Secondary structure				S	T	T									T	T	T			T	T	T											.	.	.	.		T	T								S	S											T	T	T	S							T	T		S						S	S
Template Predicted Secondary structure																																	.	.	.	.
Template SS confidence
		182	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.					.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.
		1039	1040	.	.	.	.	.	.	.	.	.	1050	.	.	.	.	.	.	.	.	.	1060	.	.	.	.	.	.	.	.	.	1070	.	.	.	.	.				.	.	.	.	1080	.	.	.	.	.	.	.	.	.	1090	.	.	.	.	.	.	.
Predicted Secondary structure																																							.	.	.
Query SS confidence																																							.	.	.
Query Sequence		D	A	Q	T	L	A	S	F	L	H	D	T	Q	L	Q	Q	R	S	G	E	T	P	D	F	S	N	T	L	F	L	L	D	E	S	S	M	V	.	.	.	G	N	T	D	M	A	R	A	Y	A	L	I	A	A	G	G	G	R	A	V	A	S
Query Conservation																																							.	.	.
Alig confidence																.	.	.	.	.																			.	.	.
Template Conservation																.	.	.	.	.
Template Sequence		D	L	M	C	H	A	T	F	T	T	R	L	L	S	.	.	.	.	.	S	T	R	V	P	N	Y	N	L	I	V	M	D	E	A	H	F	T	D	P	C	S	V	A	A	R	G	Y	I	S	T	R	V	E	M	G	E	A	A	A	I	F	M
Template Known Secondary structure																.	.	.	.	.		S						S						S	T	T			S																	T	S
Template Predicted Secondary structure																.	.	.	.	.
Template SS confidence
		258	.	260	.	.	.	.	.	.	.	.	.	270	.						.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions