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Job DescriptionP14565
Confidence97.52%DateWed Jan 25 15:20:38 GMT 2012
Rank89Aligned Residues124
% Identity17%Templatec2va8A_
PDB info PDB header:hydrolaseChain: A: PDB Molecule:ski2-type helicase; PDBTitle: dna repair helicase hel308
Resolution2.30 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   955....960.........970.........980.........990.........1000. ........1010.........1020.........1030...
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Query Sequence  MPLMERVPGELMEKLTSGQRAATRMILETSDRFTVVQGYAGVGKTTQ. FRAVMSAVNMLPESERPRVVGLGPTHRAVGEM
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Template Sequence  SNVIEIIKKRGIKKLNPPQTEAVKKGLLEGNRLL. LTSPTGSGKTLIAEMGIISFLL. . . . KNGGKAIYVTPLRALTNEK
Template Known Secondary structure  TTS

B

TTTTTT

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TTS
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   10.........20.........30.........40... ......50.........60..... ....70.........80....
 
   1034.. ...1040. ........1050.........1060.........1070.........1080.....
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Query Sequence  RSA. . . . . . . GVDAQ. . . . . . . . . . . . . . . . . . . . . TLASFLHDTQLQQRSGETPDFSNTLFLLDESSMVGNTDMARAYA
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Template Sequence  YLTFKDWELIGFKVAMTSGDYDTDDAWLKNYDIIITTYEKLDSLWRH. . . . RPEWLNEVNYFVLDELHYLNDPERGPVVE
Template Known Secondary structure  GGGGGGT



S
SSS

GGGGG
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GGGGG
SGGGGG
TTT
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   85....90.........100.........110.........120.........130. ........140.........150.........160
 
   1086.
Predicted Secondary structure 
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Query Sequence  LI
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Template Sequence  SV
Template Known Secondary structure 
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   161.
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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