Job Description P14565 Confidence 97.33% Date Wed Jan 25 15:20:38 GMT 2012 Rank 114 Aligned Residues 292 % Identity 10% Template c2v1xB_ PDB info PDB header:hydrolase Chain: B: PDB Molecule:atp-dependent dna helicase q1; PDBTitle: crystal structure of human recq-like dna helicase Resolution 2.00 Å

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		967	.	.	970	.	.	.	.	.	.	.	.	.	980	.	.	.	.	.	.	.	.	.	990	.	.	.	.	.	.	.	.	.	1000	.	.	.	.	.	.	.	.	.	1010	.	.	.	.	.	.	.	.	.	1020	.	.	.	.	.	.					.	.	.	1030	.	.	.	.	.	.	.	.	.	1040	.	.
Predicted Secondary structure																																																														.	.	.	.
Query SS confidence																																																														.	.	.	.
Query Sequence		E	K	L	T	S	G	Q	R	A	A	T	R	M	I	L	E	T	S	D	R	F	T	V	V	Q	G	Y	A	G	V	G	K	T	T	Q	F	R	A	V	M	S	A	V	N	M	L	P	E	S	E	R	P	R	V	V	G	L	G	P	T	.	.	.	.	H	R	A	V	G	E	M	R	S	A	G	V	D	A	Q	T
Query Conservation																																																														.	.	.	.
Alig confidence																					.	.													.	.									.	.	.	.	.													.	.	.	.
Template Conservation																					.	.													.	.									.	.	.	.	.
Template Sequence		E	K	F	R	P	L	Q	L	E	T	I	N	V	T	M	A	G	K	E	.	.	V	F	L	V	M	P	T	G	G	G	K	S	.	.	L	C	Y	Q	L	P	A	L	.	.	.	.	.	C	S	D	G	F	T	L	V	I	C	P	L	I	S	L	M	E	D	Q	L	M	V	L	K	Q	L	G	I	S	A	T	M
Template Known Secondary structure			S			T	T										T	T			.	.							T	T	S			T	.	.									.	.	.	.	.	S	S	S	S							S																T
Template Predicted Secondary structure																					.	.													.	.									.	.	.	.	.
Template SS confidence
		90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.			.	110	.	.	.	.	.	.	.	.	.	120			.	.	.	.	.	.	.	.						.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160
		1043	.	.	.	.	.	.	1050	.	.	.	.	.	.	.	.			.	1060	.	.	.	.	.	.	.	.	.	1070	.	.	.	.	.	.	.	.	.	1080	.	.	.	.	.	.	.	.	.	1090	.	.	.	.	.	.	.	.	.	1100	.	.	.	.	.	.	.	.	.	1110	.	.	.	.	.	.	.	.	.	1120
Predicted Secondary structure																		.	.
Query SS confidence																		.	.
Query Sequence		L	A	S	F	L	H	D	T	Q	L	Q	Q	R	S	G	E	.	.	T	P	D	F	S	N	T	L	F	L	L	D	E	S	S	M	V	G	N	T	D	M	A	R	A	Y	A	L	I	A	A	G	G	G	R	A	V	A	S	G	D	T	D	Q	L	Q	A	I	A	P	G	Q	P	F	R	L	Q	Q	T	R	S	A
Query Conservation																		.	.
Alig confidence																		.	.																																																.												.	.	.
Template Conservation																																																																			.												.	.	.
Template Sequence		L	N	A	S	S	S	K	E	H	V	K	W	V	H	A	E	M	V	N	K	N	S	E	L	K	L	I	Y	V	T	P	E	K	I	A	K	S	K	M	F	M	S	R	L	E	K	A	Y	E	A	R	R	F	T	R	I	A	V	D	E	V	H	C	C	S	.	Q	W	G	H	D	F	R	P	D	Y	K	.	.	.
Template Known Secondary structure				S	S																T	T										T					S														T	T									T	G	G	G	G	S	.	T	T	S	T	T			G	G	G	G	.	.	.
Template Predicted Secondary structure																																																																			.												.	.	.
Template SS confidence
		161	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.		.	.	.	.	230	.	.	.	.	.	.
		1121	.	.	.	.	.	.	.	.	1130	.	.	.	.	.	.	.	.	.	1140	.	.	.	.	.	.	.	.	.	1150	.	.	.	.	.	.	.	.	.	1160	.	.	.	.	.	.	.	.	.	1170	.	.	.	.	.	.	.	.	.	1180	.	.	.	.	.	.	.	.	.	1190	.	.	.	.	.	.	.	.	.	1200
Predicted Secondary structure
Query SS confidence
Query Sequence		A	D	V	A	I	M	K	E	I	V	R	Q	T	P	E	L	R	E	A	V	Y	S	L	I	N	R	D	V	E	R	A	L	S	G	L	E	S	V	K	P	S	Q	V	P	R	Q	E	G	A	W	A	P	E	H	S	V	T	E	F	S	H	S	Q	E	A	K	L	A	E	A	Q	Q	K	A	M	L	K	G	E	A
Query Conservation
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	A	L	G	I	L	K	R	Q	F	P	N	A	S	L	I	G	L	T	A	T	A	T	N	H	V	L	T	D	A	Q	K	I	L	C	I	E	K	C	F	T	F	T	A	S	F	N	R	P	N	L	Y	Y	E	V
Template Known Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	G	G								T	T	S							S	S													T	T			S											T	T
Template Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
																												237	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290
		1201	.	.	.	.	.	.	.	.	1210	.	.	.	.	.	.	.	.	.	1220	.	.	.	.	.	.	.	.	.	1230	.	.	.	.	.	.	.	.	.	1240	.	.	.	.	.	.	.	.	.	1250	.	.	.	.	.	.	.	.	.	1260	.	.	.	.	.	.	.	.	.	1270	.	.	.	.	.	.	.	.	.	1280
Predicted Secondary structure
Query SS confidence
Query Sequence		F	P	D	V	P	M	T	L	Y	E	A	I	V	R	D	Y	T	G	R	T	P	E	A	R	E	Q	T	L	I	V	T	H	L	N	E	D	R	R	V	L	N	S	M	I	H	D	V	R	E	K	A	G	E	L	G	K	E	Q	V	M	V	P	V	L	N	T	A	N	I	R	D	G	E	L	R	R	L	S	T	W
Query Conservation
Alig confidence																																																	.	.	.	.	.	.	.	.	.	.
Template Conservation																																																	.	.	.	.	.	.	.	.	.	.
Template Sequence		R	Q	K	P	S	N	T	E	D	F	I	E	D	I	V	K	L	I	N	G	R	Y	K	G	Q	S	G	I	I	Y	C	F	S	Q	K	D	S	E	Q	V	T	V	S	L	Q	N	L	.	.	.	.	.	.	.	.	.	.	G	I	H	A	G	A	Y	H	A	N	L	E	P	E	D	K	T	T	V	H	R	K	W
Template Known Secondary structure						S	S													T	T	T	T	T	T								S	S														T	.	.	.	.	.	.	.	.	.	.	T								T	T	S
Template Predicted Secondary structure																																																	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		291	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.											.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360
		1281	.	.	.	.	.	.	.	.	1290	.	.	.	.	.	.	.	.	.	1300	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		E	T	H	R	D	A	L	V	L	V	D	N	V	Y	H	R	I	A	G	I	S	K	D	D	G	L	I
Query Conservation
Alig confidence
Template Conservation
Template Sequence		S	A	N	E	I	Q	V	V	V	A	T	V	A	F	G	M	G	I	D	K	P	D	V	R	F	V	I
Template Known Secondary structure			T	T	S	S	S						T	T	S		T	T				T	T
Template Predicted Secondary structure
Template SS confidence
		361	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions