Job Description P14565 Confidence 97.52% Date Wed Jan 25 15:20:38 GMT 2012 Rank 88 Aligned Residues 152 % Identity 14% Template c2og2A_ PDB info PDB header:protein transport Chain: A: PDB Molecule:putative signal recognition particle receptor; PDBTitle: crystal structure of chloroplast ftsy from arabidopsis2 thaliana Resolution 2.00 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		429	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.				470	.	.	.	.	.	.				.	.	.	480	.	.	.	.	.	.	.	.	.									490	.	.	.	.
Predicted Secondary structure																																											.	.	.								.	.	.														.	.	.	.	.	.	.	.
Query SS confidence																																											.	.	.								.	.	.														.	.	.	.	.	.	.	.
Query Sequence		D	R	P	S	L	A	I	V	S	G	Q	G	G	A	A	G	Q	R	E	R	V	A	E	L	V	M	M	A	R	E	Q	G	R	E	V	Q	I	I	A	A	D	.	.	.	R	R	S	Q	M	N	M	.	.	.	K	Q	D	E	R	L	S	G	E	L	I	T	G	.	.	.	.	.	.	.	.	R	R	Q	L	L
Query Conservation																																											.	.	.								.	.	.														.	.	.	.	.	.	.	.
Alig confidence																.																											.	.	.								.	.	.														.	.	.	.	.	.	.	.
Template Conservation																.
Template Sequence		R	K	P	A	V	I	M	I	V	G	V	N	G	G	.	G	K	T	T	S	L	G	K	L	A	H	R	L	K	N	E	G	T	K	V	L	M	A	A	G	D	T	F	R	A	A	A	S	D	Q	L	E	I	W	A	E	R	T	G	C	E	I	V	V	A	E	G	D	K	A	K	A	A	T	V	L	S	K	A	V
Template Known Secondary structure		S	S	S									T	T	S	.																T	T											S																T							S	S	S	S
Template Predicted Secondary structure																.
Template SS confidence
		124	.	.	.	.	.	130	.	.	.	.	.	.	.		.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.
		495	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.																																					.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.		530	.	.	.	.	.	.	.
Predicted Secondary structure																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																			.
Query SS confidence																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																			.
Query Sequence		E	G	M	A	F	T	P	G	S	T	V	I	V	D	Q	G	E	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	K	L	S	L	K	E	T	L	T	L	L	D	G	A	A	R	H	N	.	V	Q	V	L	I	T	D	S
Query Conservation																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																			.
Alig confidence																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																			.
Template Conservation
Template Sequence		K	R	G	K	E	E	G	Y	D	V	V	L	C	D	T	S	G	R	L	H	T	N	Y	S	L	M	E	E	L	I	A	C	K	K	A	V	G	K	I	V	S	G	A	P	N	E	I	L	L	V	L	D	G	N	T	G	L	N	M	L	P	Q	A	R	E	F	N	E	V	V	G	I	T	G	L	I	L	T	K	L
Template Known Secondary structure							T	T		S										S	S																				S	T	T			S								G	G	G	G	G	G	G											T									S
Template Predicted Secondary structure
Template SS confidence
		203	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.
		538	.	540	.	.	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.	.	.	560	.	.	.	.	.	.	.	.	.	570	.	.	.	.	.	.	.	.	.	580	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		G	Q	R	T	G	T	G	S	A	L	M	A	M	K	D	A	G	V	N	T	Y	R	W	Q	G	G	E	Q	R	P	A	T	I	I	S	E	P	D	R	N	V	R	Y	A	R	L
Query Conservation
Alig confidence																															.	.
Template Conservation																															.	.
Template Sequence		D	G	S	A	R	G	G	C	V	V	S	V	V	E	E	L	G	I	P	V	K	F	I	G	V	G	E	A	V	.	.	E	D	L	Q	P	F	D	P	E	A	F	V	N	A	I
Template Known Secondary structure		T	T		S		T																				S	S	S	G	.	.	G	G
Template Predicted Secondary structure																															.	.
Template SS confidence
		283	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.			.	.	.	.	.	.	.	.	320	.	.	.	.	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions