Return to main results Retrieve Phyre Job Id

Job DescriptionP14565
Confidence97.59%DateWed Jan 25 15:20:38 GMT 2012
Rank80Aligned Residues123
% Identity12%Templatec2ocaA_
PDB info PDB header:hydrolaseChain: A: PDB Molecule:atp-dependent dna helicase uvsw; PDBTitle: the crystal structure of t4 uvsw
Resolution2.70 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   969970.........980.........990.........1000.........1010.........1020.........1030.........1040........
Predicted Secondary structure 






















Query SS confidence 















































































Query Sequence  LTSGQRAATRMILETSDRFTVVQGYAGVGKTTQFRAVMSAVNMLPESERPRVVGLGPTHRAVGEMRSAGVDAQTLASFLH
Query Conservation 

  
  

  



 

   
 
 






 
 

   
       
  
  



 


  
   

 
 



 
 
Alig confidence 
















..























...




















......






Template Conservation 

  
   
   
    .. 

  






            ...     

 
 
   
  
   ......       
Template Sequence  PHWYQKDAVFEGLVNRR. . RILNLPTSAGRSLIQALLARYYLE. . . NYEGKILIIVPTTALTTQMAD. . . . . . DFVDYRL
Template Known Secondary structure 

S..

STTT...
SSSS......TTS
Template Predicted Secondary structure 




..






...





......

Template SS confidence 















































































   114.....120.........130 .........140.........150.... .....160.........170..... ....180..
 
   10491050.... .....1060.........1070.........1080.........1090.........1100
Predicted Secondary structure 





............................





















Query SS confidence 





. . . . . . . . . . . . . . . . . . . . . . . . . . . .













































Query Sequence  DTQLQQ. . . . . . . . . . . . . . . . . . . . . . . . . . . . RSGETPDFSNTLFLLDESSMVGNTDMARAYALIAAGGGRAVASGDT
Query Conservation        ............................           









       

  
   








 
Alig confidence 





............................













































Template Conservation       
                  
       
             

 

 
                    
 




Template Sequence  FSHAMIKKIGGGASKDDKYKNDAPVVVGTWQTVVKQPKEWFSQFGMMMNDECHLATGKSISSIISGLNNCMFKFGLSGSL
Template Known Secondary structure  S
GGG
GGG

TTGGG
TT
STTS
GGGGGGTGGG

GGG
TT

S
G
Template Predicted Secondary structure 























Template SS confidence 















































































   183......190.........200.........210.........220.........230.........240.........250.........260..
 
   1101.
Predicted Secondary structure 
Query SS confidence 

Query Sequence  DQ
Query Conservation   
Alig confidence 

Template Conservation    
Template Sequence  RD
Template Known Secondary structure  GG
Template Predicted Secondary structure 
Template SS confidence 

   263.
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions