Return to main results Retrieve Phyre Job Id

Job DescriptionP14565
Confidence97.85%DateWed Jan 25 15:20:38 GMT 2012
Rank54Aligned Residues105
% Identity26%Templatec2jlrA_
PDB info PDB header:hydrolaseChain: A: PDB Molecule:serine protease subunit ns3; PDBTitle: dengue virus 4 ns3 helicase in complex with amppnp
Resolution2.0 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   984.....990......... 1000.........1010.........1020.........1030...... ...1040.
Predicted Secondary structure 







.






.....................



Query SS confidence 















.




































. . . . . . . . . . . . . . . . . . . . .




Query Sequence  SDRFTVVQGYAGVGKT. TQFRAVMSAVNMLPESERPRVVGLGPTHRAVGEMRSA. . . . . . . . . . . . . . . . . . . . . GVDAQ
Query Conservation   

   
 
 





.
 
 

   
       
  
  



 


  
   .....................

 
 
Alig confidence 















.










....





















.....................




Template Conservation       

   





       
    ....      


 
 
 

 
    
                     
 
 
Template Sequence  KKRLTIMDLHPGAGKTKRILPSIVREAL. . . . KRRLRTLILAPTRVVAAEMEEALRGLPIRYQTPAVKSDHTGREIVDLM
Template Known Secondary structure  TT



TTSSTTTT....TT

SSTTTS


TTSS



SSS
Template Predicted Secondary structure 








....



















Template SS confidence 















































































   185....190.........200.........210.. .......220.........230.........240.........250.........260
 
   1042.......1050.........1060.........1070........ .1080.........1090.......
Predicted Secondary structure 






















...


Query SS confidence 




































. . .


















Query Sequence  TLASFLHDTQLQQRSGETPDFSNTLFLLDESSMVGNT. . . DMARAYALIAAGGGRAVAS
Query Conservation 



 
                  









   ...    

  
   






Alig confidence 











.....



















...


















Template Conservation 
   
   
   .....        




 
                        
  
Template Sequence  CHATFTTRLLSS. . . . . TRVPNYNLIVMDEAHFTDPCSVAARGYISTRVEMGEAAAIFM
Template Known Secondary structure 
.....S




SSTT

STTS
Template Predicted Secondary structure 



.....
















Template SS confidence 


























































   261........270.. .......280.........290.........300.........310....
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions